miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 97.6 bits (49), Expect = 2e-21
 Identities = 86/97 (88%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                       
Query: 10  tatatgcctggctccctgtatgccatttccagagcccaccagtatcaccggtgacctccg 69
           |||||||||||||||||||||||||||| ||||||||||| | | || || || ||| ||
Sbjct: 7   tatatgcctggctccctgtatgccatttgcagagcccaccggca-catcgatggccttcg 65

                                                
Query: 70  tgaatggcgtatgaggagccaagcatattccccatct 106
           || |||||||||||||||||| |||||| ||||||||
Sbjct: 66  tggatggcgtatgaggagccatgcatatgccccatct 102




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 91.7 bits (46), Expect = 1e-19
 Identities = 77/86 (89%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                      
Query: 14 tgcctggctccctgtatgccatttccagagcccaccagtatcaccggtgacctccgtgaa 73
          |||||||||||||||||||||||| ||||||||||| || ||  || || |||||||| |
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggt-tcttcgatggcctccgtgga 69

                                    
Query: 74 tggcgtatgaggagccaagcatattc 99
          ||||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 76/86 (88%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                      
Query: 14 tgcctggctccctgtatgccatttccagagcccaccagtatcaccggtgacctccgtgaa 73
          |||||||||||||||||||||||| ||||||||| | | |||  || || |||||||| |
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaac-ggatcctcgatggcctccgtgga 69

                                    
Query: 74 tggcgtatgaggagccaagcatattc 99
          ||||||||||||||||| ||||||||
Sbjct: 70 tggcgtatgaggagccatgcatattc 95




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 83/97 (85%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   tataagtatatgcctggctccctgtatgccatttccagagcccaccagtatcaccggtga 63
           ||||| ||| |||||||||||||||||||||||| ||||| | | | | | || || || 
Sbjct: 23  tataattatgtgcctggctccctgtatgccatttgcagagtcaatc-gaaacatcgatgg 81

                                                
Query: 64  cctccgtgaatggcgtatgaggagccaagcatattcc 100
           |||||||| |||||||||||||||||| |||||||||
Sbjct: 82  cctccgtggatggcgtatgaggagccatgcatattcc 118




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 76/87 (87%), Gaps = 4/87 (4%)
 Strand = Plus / Plus

                                                                      
Query: 12 tatgcctggctccctgtatgccatttccagagcccacc-agtatcaccggtgacctccgt 70
          |||||||||||||||||||||||| | | ||||||| | ||||||   | ||||||||||
Sbjct: 2  tatgcctggctccctgtatgccatatgctgagcccatcgagtatc---gatgacctccgt 58

                                     
Query: 71 gaatggcgtatgaggagccaagcatat 97
          | |||||||||||||||||| ||||||
Sbjct: 59 ggatggcgtatgaggagccatgcatat 85




>40312_bra-MIR160a:mirbase
          Length = 127

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 61  tgacctccgtgaatggcgtatgaggagccaagcatatt 98
           |||||||||||||||||||||||||||||| |||||||
Sbjct: 71  tgacctccgtgaatggcgtatgaggagccatgcatatt 108



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 12 tatgcctggctccctgtatgccat 35
          ||||||||||||||||||||||||
Sbjct: 24 tatgcctggctccctgtatgccat 47




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 65.9 bits (33), Expect = 6e-12
 Identities = 75/87 (86%), Gaps = 4/87 (4%)
 Strand = Plus / Plus

                                                                       
Query: 12  tatgcctggctccctgtatgccatttccagagcccacc-agtatcaccggtgacctccgt 70
           |||||||||||||||||||||||| | | |||| || | ||||||   | ||||||||||
Sbjct: 40  tatgcctggctccctgtatgccatatgctgagctcatcgagtatc---gatgacctccgt 96

                                      
Query: 71  gaatggcgtatgaggagccaagcatat 97
           | |||||||||||||||||| ||||||
Sbjct: 97  ggatggcgtatgaggagccatgcatat 123




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 70  tgaatggcgtatgaggagccaagcatattcc 100
           |||||||||||||||||||||||||||||||
Sbjct: 78  tgaatggcgtatgaggagccaagcatattcc 108



 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 9  gtatatgcctggctccctgtatgccattt 37
          |||||||||||||||||||||||||||||
Sbjct: 15 gtatatgcctggctccctgtatgccattt 43




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 76/90 (84%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                       
Query: 9   gtatatgcctggctccctgtatgccatttccagagcccaccagtatcaccggtgacctcc 68
           |||| ||||||||||||||||||||||||  ||||| || | | | || |  ||||||  
Sbjct: 16  gtatgtgcctggctccctgtatgccatttgtagagctcatc-gaagcatcaatgaccttt 74

                                         
Query: 69  gtgaatggcgtatgaggagccaagcatatt 98
           ||| ||||||||||||||||||||||||||
Sbjct: 75  gtggatggcgtatgaggagccaagcatatt 104




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 12 tatgcctggctccctgtatgccatttccagagccca 47
          |||||||||||||||||||||||||| || ||||||
Sbjct: 19 tatgcctggctccctgtatgccatttgcaaagccca 54




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 73  atggcgtatgaggagccaagcatattcc 100
           ||||||||||||||||||||||||||||
Sbjct: 64  atggcgtatgaggagccaagcatattcc 91



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gtatatgcctggctccctgtatgccat 35
          |||| ||||||||||||||||||||||
Sbjct: 1  gtatgtgcctggctccctgtatgccat 27




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 73  atggcgtatgaggagccaagcatattcc 100
           ||||||||||||||||||||||||||||
Sbjct: 64  atggcgtatgaggagccaagcatattcc 91



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 9  gtatatgcctggctccctgtatgccat 35
          |||| ||||||||||||||||||||||
Sbjct: 1  gtatgtgcctggctccctgtatgccat 27




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 atgcctggctccctgtatgccattt 37
          |||||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccattt 34




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 atatgcctggctccctgtatgcca 34
          ||||||||||||||||||||||||
Sbjct: 6  atatgcctggctccctgtatgcca 29




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 atatgcctggctccctgtatgcca 34
          ||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 atatgcctggctccctgtatgcca 34
          ||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 atatgcctggctccctgtatgcca 34
          ||||||||||||||||||||||||
Sbjct: 5  atatgcctggctccctgtatgcca 28




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 atatgcctggctccctgtatgcca 34
          ||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 tgcctggctccctgtatgccattt 37
          ||||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccattt 24




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 tgcctggctccctgtatgccattt 37
          ||||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccattt 29




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 tgcctggctccctgtatgccattt 37
          ||||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccattt 44




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 tgcctggctccctgtatgccattt 37
          ||||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccattt 29




>42706_zma-MIR160f:mirbase
          Length = 116

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 atatgcctggctccctgtatgcc 33
          |||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40




>41927_osa-MIR160e:mirbase
          Length = 114

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 11 atatgcctggctccctgtatgcc 33
          |||||||||||||||||||||||
Sbjct: 8  atatgcctggctccctgtatgcc 30




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tatgcctggctccctgtatgcca 34
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tatgcctggctccctgtatgcca 34
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tatgcctggctccctgtatgcca 34
          |||||||||||||||||||||||
Sbjct: 4  tatgcctggctccctgtatgcca 26




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tatgcctggctccctgtatgcca 34
          |||||||||||||||||||||||
Sbjct: 3  tatgcctggctccctgtatgcca 25




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tatgcctggctccctgtatgcca 34
          |||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 atgcctggctccctgtatgcca 34
          ||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgcca 22




>41869_far-MIR160:mirbase
          Length = 148

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 atgcctggctccctgtatgcca 34
          ||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 tgcctggctccctgtatgccat 35
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 14 tgcctggctccctgtatgccat 35
          ||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgcca 29




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 tgcctggctccctgtatgcca 34
          |||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34