miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32200_mmu-mir-532:mirbase
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 cagatttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagatttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccct 60
Query: 61 cccacacccaaggcttgcaggagagcaagccttctc 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccacacccaaggcttgcaggagagcaagccttctc 96
>32947_rno-mir-532:mirbase
Length = 79
Score = 149 bits (75), Expect = 4e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 11 ttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccacaccca 70
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 ttttctcttccatgccttgagtgtaggactgttgacatcttaattaccctcccacaccca 60
Query: 71 aggcttgcaggagagcaag 89
|||||||||||||||||||
Sbjct: 61 aggcttgcaggagagcaag 79
>32948_rno-mir-532:mirbase
Length = 79
Score = 149 bits (75), Expect = 4e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 11 ttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccacaccca 70
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1 ttttctcttccatgccttgagtgtaggactgttgacatcttaattaccctcccacaccca 60
Query: 71 aggcttgcaggagagcaag 89
|||||||||||||||||||
Sbjct: 61 aggcttgcaggagagcaag 79
>27223_eca-mir-532:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 3 gatttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcc 62
|||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 gatttgctttctctcttacatgccttgagtgtaggaccgttggcatcttaattaccctcc 60
Query: 63 cacacccaaggcttgcaggagagcaagcct 92
||||||||||||||||||||| ||||||||
Sbjct: 61 cacacccaaggcttgcaggagggcaagcct 90
>27224_eca-mir-532:mirbase
Length = 90
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 3 gatttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcc 62
|||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1 gatttgctttctctcttacatgccttgagtgtaggaccgttggcatcttaattaccctcc 60
Query: 63 cacacccaaggcttgcaggagagcaagcct 92
||||||||||||||||||||| ||||||||
Sbjct: 61 cacacccaaggcttgcaggagggcaagcct 90
>33410_bta-mir-532:mirbase
Length = 86
Score = 137 bits (69), Expect = 2e-33
Identities = 78/81 (96%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4 ttgctttctctcttacatgccttgagtgtaggaccgttggcatcttaattaccctcccac 63
Query: 66 acccaaggcttgcaggagagc 86
|||||||||||||||||||||
Sbjct: 64 acccaaggcttgcaggagagc 84
>30465_ptr-mir-532:mirbase
Length = 90
Score = 133 bits (67), Expect = 3e-32
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4 ttgctttctctcctccatgccttgagtgtaggaccgttggcatcttaattaccctcccac 63
Query: 66 acccaaggcttgcaggagagcaagcct 92
||||||||||||||| ||||| |||||
Sbjct: 64 acccaaggcttgcagaagagcgagcct 90
>31124_ppy-mir-532:mirbase
Length = 91
Score = 133 bits (67), Expect = 3e-32
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 ttgctttctctcctccatgccttgagtgtaggaccgttggcatcttaattaccctcccac 64
Query: 66 acccaaggcttgcaggagagcaagcct 92
||||||||||||||| ||||| |||||
Sbjct: 65 acccaaggcttgcagaagagcgagcct 91
>31125_ppy-mir-532:mirbase
Length = 91
Score = 133 bits (67), Expect = 3e-32
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 ttgctttctctcctccatgccttgagtgtaggaccgttggcatcttaattaccctcccac 64
Query: 66 acccaaggcttgcaggagagcaagcct 92
||||||||||||||| ||||| |||||
Sbjct: 65 acccaaggcttgcagaagagcgagcct 91
>27988_mml-mir-532:mirbase
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 ttgctttctctcctccatgccttgagtgtaggaccgttggcatcttaattaccctcccac 64
Query: 66 acccaaggcttgca 79
||||||||||||||
Sbjct: 65 acccaaggcttgca 78
>27987_mml-mir-532:mirbase
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 ttgctttctctcctccatgccttgagtgtaggaccgttggcatcttaattaccctcccac 64
Query: 66 acccaaggcttgca 79
||||||||||||||
Sbjct: 65 acccaaggcttgca 78
>28785_hsa-mir-532:mirbase
Length = 91
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 ttgctttctctcctccatgccttgagtgtaggaccgttggcatcttaattaccctcccac 64
Query: 66 acccaaggcttgca 79
||||||||||||||
Sbjct: 65 acccaaggcttgca 78
>28786_hsa-mir-532:mirbase
Length = 91
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 ttgctttctctcctccatgccttgagtgtaggaccgttggcatcttaattaccctcccac 64
Query: 66 acccaaggcttgca 79
||||||||||||||
Sbjct: 65 acccaaggcttgca 78
>34118_ssc-mir-532:mirbase
Length = 80
Score = 107 bits (54), Expect = 1e-24
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||||| |||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 1 ttgctttctctcttacatgccttgagtgtaggaccgttggcatctgaa-taccctcccac 59
Query: 66 acccaaggcttgcaggag 83
||||||||||||||||||
Sbjct: 60 acccaaggcttgcaggag 77
>34119_ssc-mir-532:mirbase
Length = 80
Score = 107 bits (54), Expect = 1e-24
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 6 ttgctttttctcttccatgccttgagtgtaggaccgttgacatcttaattaccctcccac 65
||||||| |||||| |||||||||||||||||||||||| ||||| || |||||||||||
Sbjct: 1 ttgctttctctcttacatgccttgagtgtaggaccgttggcatctgaa-taccctcccac 59
Query: 66 acccaaggcttgcaggag 83
||||||||||||||||||
Sbjct: 60 acccaaggcttgcaggag 77
>26874_cfa-mir-532:mirbase
Length = 59
Score = 101 bits (51), Expect = 9e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 21 catgccttgagtgtaggaccgttgacatcttaattaccctcccacacccaaggcttgca 79
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 catgccttgagtgtaggaccgttggtatcttaattaccctcccacacccaaggcttgca 59
