miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31788_mmu-mir-22:mirbase
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 acctggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagc 60
Query: 61 tgccagttgaagaactgttgccctctgccactggc 95
||||||||||||||||||||||||||||| |||||
Sbjct: 61 tgccagttgaagaactgttgccctctgcccctggc 95
>26958_eca-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>27489_age-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>27549_lla-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>27664_mml-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>28181_mne-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>28373_hsa-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>30053_ppa-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>30160_ptr-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>30765_ppy-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>31402_lca-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>33142_bta-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>33143_bta-mir-22:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>27597_sla-mir-22:mirbase
Length = 85
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 5 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgcc 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ggctgagccgcagtagttcttcagtggcaagctttatgtcctgaccccgctaaagctgcc 60
Query: 65 agttgaagaactgttgccctctgcc 89
|||||||||||||||||||||||||
Sbjct: 61 agttgaagaactgttgccctctgcc 85
>33790_bta-mir-3600:mirbase
Length = 81
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Minus
Query: 7 ctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgccag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgccag 22
Query: 67 ttgaagaactgttgccctctg 87
|||||||||||||||||||||
Sbjct: 21 ttgaagaactgttgccctctg 1
>33924_ssc-mir-22:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 9 gagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgccagtt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgccagtt 60
Query: 69 gaagaactgttgccctctgc 88
||||||||||||||||||||
Sbjct: 61 gaagaactgttgccctctgc 80
>33925_ssc-mir-22:mirbase
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 9 gagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgccagtt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgccagtt 60
Query: 69 gaagaactgttgccctctgc 88
||||||||||||||||||||
Sbjct: 61 gaagaactgttgccctctgc 80
>26636_cfa-mir-22:mirbase
Length = 60
Score = 119 bits (60), Expect = 4e-28
Identities = 60/60 (100%)
Strand = Plus / Plus
Query: 19 agttcttcagtggcaagctttatgtcctgacccagctaaagctgccagttgaagaactgt 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agttcttcagtggcaagctttatgtcctgacccagctaaagctgccagttgaagaactgt 60
>31439_oan-mir-22:mirbase
Length = 122
Score = 117 bits (59), Expect = 1e-27
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 2 cctggctgagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagct 61
|||||||||| | ||| |||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 19 cctggctgagtcacagcagttcttcagtggcaagctttacgtcctgtcccagctaaagct 78
Query: 62 gccagttgaagaactgttg 80
|||||||||||||||||||
Sbjct: 79 gccagttgaagaactgttg 97
>27342_mdo-mir-22:mirbase
Length = 81
Score = 97.6 bits (49), Expect = 1e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 9 gagccgcagtagttcttcagtggcaagctttatgtcctgacccagctaaagctgccagtt 68
||||| ||| |||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 3 gagccacagcagttcttcagtggcgagctttatgtcttgtcccagctaaagctgccagtt 62
Query: 69 gaagaactg 77
|||||||||
Sbjct: 63 gaagaactg 71
>25906_gga-mir-22:mirbase
Length = 100
Score = 71.9 bits (36), Expect = 8e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 14 gcagtagttcttcagtggcaagctttatgtcctgacc---cagctaaagctgccagttga 70
|||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 16 gcagcagttcttcagtggcaagctttatgtccttctctagtagctaaagctgccagttga 75
Query: 71 agaactgttg 80
||||||||||
Sbjct: 76 agaactgttg 85
>34222_dre-mir-22a:mirbase
Length = 86
Score = 71.9 bits (36), Expect = 8e-14
Identities = 62/70 (88%), Gaps = 3/70 (4%)
Strand = Plus / Plus
Query: 14 gcagtagttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttga 70
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 9 gcagcagttcttcactggcaagctttatgtccttgtgtaccagctaaagctgccagctga 68
Query: 71 agaactgttg 80
||||||||||
Sbjct: 69 agaactgttg 78
>34556_fru-mir-22b:mirbase
Length = 86
Score = 67.9 bits (34), Expect = 1e-12
Identities = 62/69 (89%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 15 cagtagttcttcagtggcaagctttatgtcct--gaccca-gctaaagctgccagttgaa 71
|||| |||||||| |||| ||||||||||||| |||||| |||||||||||||||||||
Sbjct: 10 cagtcgttcttcactggctagctttatgtcctctgacccatgctaaagctgccagttgaa 69
Query: 72 gaactgttg 80
|| ||||||
Sbjct: 70 gagctgttg 78
>34555_fru-mir-22a:mirbase
Length = 86
Score = 61.9 bits (31), Expect = 8e-11
Identities = 57/65 (87%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 19 agttcttcagtggcaagctttatgtcct---gacccagctaaagctgccagttgaagaac 75
||||||||| |||||||||||||||||| | |||||||||||||||| ||||||||
Sbjct: 14 agttcttcactggcaagctttatgtcctcgtgcaacagctaaagctgccagctgaagaac 73
Query: 76 tgttg 80
|||||
Sbjct: 74 tgttg 78
>25712_xtr-mir-22:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/64 (87%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 19 agttcttcagtggcaagctttatgtcctgacccag--ctaaagctgccagttgaagaact 76
||||||||||||||||||||||||| | | | | |||||||||||||||||||||||
Sbjct: 17 agttcttcagtggcaagctttatgttgttcctctgtgctaaagctgccagttgaagaact 76
Query: 77 gttg 80
||||
Sbjct: 77 gttg 80
>34704_tni-mir-22b:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 61/70 (87%), Gaps = 4/70 (5%)
Strand = Plus / Plus
Query: 15 cagtagttcttcagtggcaagctttatgtcct--gaccca--gctaaagctgccagttga 70
|||| |||||||| |||| ||||||||||||| ||||| ||||||||||||||||||
Sbjct: 10 cagtcgttcttcactggctagctttatgtcctccgaccccacgctaaagctgccagttga 69
Query: 71 agaactgttg 80
||| ||||||
Sbjct: 70 agagctgttg 79
>34703_tni-mir-22a:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 56/65 (86%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 19 agttcttcagtggcaagctttatgtcc---tgacccagctaaagctgccagttgaagaac 75
||||||||| ||||||||||||||||| || | |||||||||||||| ||||||||
Sbjct: 14 agttcttcactggcaagctttatgtcctcgtgcaaccgctaaagctgccagctgaagaac 73
Query: 76 tgttg 80
|||||
Sbjct: 74 tgttg 78
>34223_dre-mir-22b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 55 taaagctgccagttgaagaactgttg 80
||||||||||||||||||| ||||||
Sbjct: 49 taaagctgccagttgaagagctgttg 74
>25441_pma-mir-22b:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 ctaaagctgccagttgaaga 73
||||||||||||||||||||
Sbjct: 50 ctaaagctgccagttgaaga 69
