miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31794_mmu-mir-26a-1:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 aaggccgtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctatt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggccgtggcctcgttcaagtaatccaggataggctgtgcaggtcccaaggggcctatt 60
Query: 61 cttggttacttgcacggggacgcgggcctg 90
||||||||||||||||||||||||||||||
Sbjct: 61 cttggttacttgcacggggacgcgggcctg 90
>33150_bta-mir-26a-1:mirbase
Length = 90
Score = 155 bits (78), Expect = 6e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 aaggccgtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctatt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggccgtggcctcgttcaagtaatccaggataggctgtgcaggtcccaaggggcctatt 60
Query: 61 cttggttacttgcacggggacgcgggcctg 90
|| ||||||||||||| |||||||||||||
Sbjct: 61 ctcggttacttgcacgcggacgcgggcctg 90
>33153_bta-mir-26c:mirbase
Length = 90
Score = 155 bits (78), Expect = 6e-39
Identities = 87/90 (96%)
Strand = Plus / Minus
Query: 1 aaggccgtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctatt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 aaggccgtggcctcgttcaagtaatccaggataggctgtgcaggtcccaaggggcctatt 31
Query: 61 cttggttacttgcacggggacgcgggcctg 90
|| ||||||||||||| |||||||||||||
Sbjct: 30 ctcggttacttgcacgcggacgcgggcctg 1
>27551_lla-mir-26a:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 67 tacttgcacggggacgc 83
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>27670_mml-mir-26a-1:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 67 tacttgcacggggacgc 83
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>28272_ggo-mir-26a:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 67 tacttgcacggggacgc 83
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>28380_hsa-mir-26a-1:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 67 tacttgcacggggacgc 83
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>30059_ppa-mir-26a:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 67 tacttgcacggggacgc 83
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>30166_ptr-mir-26a-1:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 67 tacttgcacggggacgc 83
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>30771_ppy-mir-26a:mirbase
Length = 77
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 67 tacttgcacggggacgc 83
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>26965_eca-mir-26a-2:mirbase
Length = 77
Score = 129 bits (65), Expect = 4e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggt 60
Query: 67 tacttgcacggggacgc 83
|||||||||| ||||||
Sbjct: 61 tacttgcacgcggacgc 77
>28186_mne-mir-26a:mirbase
Length = 77
Score = 129 bits (65), Expect = 4e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggt 66
||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 1 gtggcctcgttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttgat 60
Query: 67 tacttgcacggggacgc 83
|||||||||||||||||
Sbjct: 61 tacttgcacggggacgc 77
>26642_cfa-mir-26a-1:mirbase
Length = 61
Score = 113 bits (57), Expect = 2e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgtgcaggtcccaaggggcctattcttggttacttgcac 75
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgtgcaggtcccaatgggcctattcttggttacttgcac 60
Query: 76 g 76
|
Sbjct: 61 g 61
>26414_tgu-mir-26-1:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgt 39
||||||| |||||||||||||||||||||||||
Sbjct: 2 gtggcctggttcaagtaatccaggataggctgt 34
>26415_tgu-mir-26-2:mirbase
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 7 gtggccttgttcaagtaatccaggataggctgt 39
||||||| |||||||||||||||||||||||||
Sbjct: 2 gtggcctggttcaagtaatccaggataggctgt 34
>34234_dre-mir-26a-2:mirbase
Length = 128
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 ccttgttcaagtaatccaggataggctgt 39
|||||||||||||||||||||||||||||
Sbjct: 32 ccttgttcaagtaatccaggataggctgt 60
>25447_pma-mir-26a-2:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 tgttcaagtaatccaggataggctgtg 40
|||||||||||||||||||||||||||
Sbjct: 17 tgttcaagtaatccaggataggctgtg 43
>25721_xtr-mir-26-1:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 10 gccttgttcaagtaatccaggataggctgt 39
|||| |||||||||||||||||||||||||
Sbjct: 8 gcctggttcaagtaatccaggataggctgt 37
>34233_dre-mir-26a-1:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 tggccttgttcaagtaatccaggataggct 37
|||||| |||||||||||||||||||||||
Sbjct: 3 tggcctggttcaagtaatccaggataggct 32
>34565_fru-mir-26:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 ggccttgttcaagtaatccaggataggctg 38
||||| ||||||||||||||||||||||||
Sbjct: 8 ggcctggttcaagtaatccaggataggctg 37
>34712_tni-mir-26:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 ggccttgttcaagtaatccaggataggctg 38
||||| ||||||||||||||||||||||||
Sbjct: 13 ggcctggttcaagtaatccaggataggctg 42
>25446_pma-mir-26a-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 10 gccttgttcaagtaatccaggataggctg 38
|||| ||||||||||||||||||||||||
Sbjct: 8 gcctggttcaagtaatccaggataggctg 36
>25448_pma-mir-26b:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 ggccgtggccttgttcaagtaatccaggatagg 35
||||||||||| ||||||||||||||||||||
Sbjct: 3 ggccgtggcctgattcaagtaatccaggatagg 35
>25909_gga-mir-26a:mirbase
Length = 77
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttcaagtaatccaggataggctgt 39
|||||||||||||||||||||||||
Sbjct: 9 gttcaagtaatccaggataggctgt 33
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 53 ggcctattcttggttacttgcacgggga 80
||||||||||||||||||||||| ||||
Sbjct: 47 ggcctattcttggttacttgcactggga 74
>27348_mdo-mir-26-1:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgtg 40
|||||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgtg 25
>31443_oan-mir-26:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 gttcaagtaatccaggataggctgt 39
|||||||||||||||||||||||||
Sbjct: 13 gttcaagtaatccaggataggctgt 37
>31795_mmu-mir-26a-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgtg 40
|||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgtg 38
>25722_xtr-mir-26-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 12 ttcaagtaatccaggataggctgt 35
>26643_cfa-mir-26a-2:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 1 ttcaagtaatccaggataggctgt 24
>26964_eca-mir-26a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>27349_mdo-mir-26-2:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 5 ttcaagtaatccaggataggctgt 28
>27350_mdo-mir-26-3:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 gttcaagtaatccaggataggctg 38
||||||||||||||||||||||||
Sbjct: 6 gttcaagtaatccaggataggctg 29
>27671_mml-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>28381_hsa-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>30167_ptr-mir-26a-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 13 ttcaagtaatccaggataggctgt 36
>30772_ppy-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>33151_bta-mir-26a-2:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>33930_ssc-mir-26a:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 ttcaagtaatccaggataggctgt 39
||||||||||||||||||||||||
Sbjct: 14 ttcaagtaatccaggataggctgt 37
>34235_dre-mir-26a-3:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 15 gttcaagtaatccaggataggct 37
|||||||||||||||||||||||
Sbjct: 38 gttcaagtaatccaggataggct 60
>34236_dre-mir-26b:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gccttgttcaagtaatccaggatagg 35
|||| |||||||||||||||||||||
Sbjct: 14 gcctggttcaagtaatccaggatagg 39
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 ggcctattcttggttacttg 72
||||||||||||||||||||
Sbjct: 57 ggcctattcttggttacttg 76
