miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41578_vvi-MIR162:mirbase
          Length = 103

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 125 gaatcggtcgataaacctctgcatccagcgttcac 159
           |||||||||||||||||||||||||||||||||||
Sbjct: 66  gaatcggtcgataaacctctgcatccagcgttcac 100



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
          |||||||||||||||||||||||||| ||||
Sbjct: 7  cactggatgcagcggttcatcgatctcttcc 37




>41530_sly-MIR162:mirbase
          Length = 99

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                              
Query: 118 gcaaaaggaatcggtcgataaacctctgcatccag 152
           |||||||||||||||||||||||||||||||||||
Sbjct: 65  gcaaaaggaatcggtcgataaacctctgcatccag 99




>40663_mtr-MIR162:mirbase
          Length = 124

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
          |||||||||||||||||||||||||||||||
Sbjct: 19 cactggatgcagcggttcatcgatctgttcc 49



 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 125 gaatcggtcgataaacctctgcatccagcgttcac 159
           |||||||||||||||||||||||||||||| ||||
Sbjct: 80  gaatcggtcgataaacctctgcatccagcgctcac 114




>42708_zma-MIR162:mirbase
          Length = 130

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 124 ggaatcggtcgataaacctctgcatccag 152
           |||||||||||||||||||||||||||||
Sbjct: 102 ggaatcggtcgataaacctctgcatccag 130




>40329_cpa-MIR162a:mirbase
          Length = 109

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 125 gaatcggtcgataaacctctgcatccagcgtt 156
           |||||| |||||||||||||||||||||||||
Sbjct: 73  gaatcgatcgataaacctctgcatccagcgtt 104



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
          ||||||| |||||||||||||||||| ||||
Sbjct: 11 cactggaggcagcggttcatcgatctcttcc 41




>41220_csi-MIR162:mirbase
          Length = 201

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 125 gaatcggtcgataaacctctgcatccagcgttcac 159
           |||||| ||||||||||||||||||||||| ||||
Sbjct: 154 gaatcgatcgataaacctctgcatccagcgctcac 188



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 10  cactggatgcagcggttcatcgatc 34
           ||||||| |||||||||||||||||
Sbjct: 87  cactggaggcagcggttcatcgatc 111




>40437_gma-MIR162:mirbase
          Length = 102

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
          |||||||||||||||||||||||||| ||||
Sbjct: 8  cactggatgcagcggttcatcgatctcttcc 38



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 125 gaatcggtcgataaacctctgcatccagcgttcac 159
           |||||| ||||||||||||||||||||||| ||||
Sbjct: 66  gaatcgatcgataaacctctgcatccagcgctcac 100




>41046_ghr-MIR162a:mirbase
          Length = 148

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 125 gaatcggtcgataaacctctgcatccagcg 154
           |||||| |||||||||||||||||||||||
Sbjct: 87  gaatcgatcgataaacctctgcatccagcg 116



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 8  gacactggatgcagcggttcatcgatctgttcc 40
          ||||||||| |||||||||||||||||| ||||
Sbjct: 20 gacactggaggcagcggttcatcgatctcttcc 52




>40342_rco-MIR162:mirbase
          Length = 101

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 125 gaatcggtcgataaacctctgcatccagcg 154
           |||||| |||||||||||||||||||||||
Sbjct: 69  gaatcgatcgataaacctctgcatccagcg 98



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 10 cactggatgcagcggttcatcgatctgttcc 40
          ||||||| |||||||||||||||||| ||||
Sbjct: 2  cactggaggcagcggttcatcgatctcttcc 32




>40025_ath-MIR162b:mirbase
          Length = 111

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 125 gaatcggtcgataaacctctgcatccagcg 154
           |||||| |||||||||||||||||||||||
Sbjct: 72  gaatcgatcgataaacctctgcatccagcg 101




>39813_aly-MIR162b:mirbase
          Length = 184

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 125 gaatcggtcgataaacctctgcatccagcg 154
           |||||| |||||||||||||||||||||||
Sbjct: 106 gaatcgatcgataaacctctgcatccagcg 135




>42502_sbi-MIR162:mirbase
          Length = 127

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 124 ggaatcggtcgataaacctctgcatccag 152
           ||||||| |||||||||||||||||||||
Sbjct: 99  ggaatcgatcgataaacctctgcatccag 127




>41929_osa-MIR162a:mirbase
          Length = 171

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 124 ggaatcggtcgataaacctctgcatccag 152
           ||||||| |||||||||||||||||||||
Sbjct: 135 ggaatcgatcgataaacctctgcatccag 163




>41315_ptc-MIR162c:mirbase
          Length = 107

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 8  gacactggatgcagcggttcatcgatctgttcc 40
          ||||||||| |||||||||||||||||| ||||
Sbjct: 7  gacactggaggcagcggttcatcgatcttttcc 39



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 132 tcgataaacctctgcatccag 152
           |||||||||||||||||||||
Sbjct: 78  tcgataaacctctgcatccag 98




>41314_ptc-MIR162b:mirbase
          Length = 107

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 8  gacactggatgcagcggttcatcgatctgttcc 40
          ||||||||| |||||||||||||||||| ||||
Sbjct: 7  gacactggaggcagcggttcatcgatcttttcc 39



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 132 tcgataaacctctgcatccag 152
           |||||||||||||||||||||
Sbjct: 78  tcgataaacctctgcatccag 98




>41313_ptc-MIR162a:mirbase
          Length = 107

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 8  gacactggatgcagcggttcatcgatctgttcc 40
          ||||||||| |||||||||||||||||| ||||
Sbjct: 7  gacactggaggcagcggttcatcgatctcttcc 39



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 132 tcgataaacctctgcatccagcg 154
           |||||||||||||||||||||||
Sbjct: 78  tcgataaacctctgcatccagcg 100




>41090_tcc-MIR162:mirbase
          Length = 131

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 8  gacactggatgcagcggttcatcgatctgttcc 40
          ||||||||| |||||||||||||||||| ||||
Sbjct: 17 gacactggaggcagcggttcatcgatctcttcc 49



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 132 tcgataaacctctgcatccag 152
           |||||||||||||||||||||
Sbjct: 91  tcgataaacctctgcatccag 111




>40024_ath-MIR162a:mirbase
          Length = 140

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 132 tcgataaacctctgcatccagcgtt 156
           |||||||||||||||||||||||||
Sbjct: 89  tcgataaacctctgcatccagcgtt 113



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 12 ctggatgcagcggttcatcgatctgttcc 40
          ||||| |||||||||||||||||| ||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcc 53




>39812_aly-MIR162a:mirbase
          Length = 228

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 132 tcgataaacctctgcatccagcgtt 156
           |||||||||||||||||||||||||
Sbjct: 136 tcgataaacctctgcatccagcgtt 160



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 12 ctggatgcagcggttcatcgatctgttcc 40
          ||||| |||||||||||||||||| ||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcc 96




>41736_bdi-MIR162:mirbase
          Length = 133

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 124 ggaatcggtcgataaacctctgcatcc 150
           ||||||| |||||||||||||||||||
Sbjct: 103 ggaatcgatcgataaacctctgcatcc 129




>41930_osa-MIR162b:mirbase
          Length = 134

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 123 aggaatcggtcgataaacctctgcatccag 152
           |||||||| ||||||| |||||||||||||
Sbjct: 95  aggaatcgatcgataagcctctgcatccag 124