miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38855_lgi-mir-29:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 56 tcctctagcaccatatgaaatcagttt 82
|||||||||||||| ||||||||||||
Sbjct: 56 tcctctagcaccatttgaaatcagttt 82
>38735_cte-mir-29a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 59 tctagcaccatatgaaatcagttttcc 85
||||||||||| |||||||||||||||
Sbjct: 59 tctagcaccatttgaaatcagttttcc 85
>24654_bfl-mir-29a:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatatgaaatcagtt 81
|||||||||||||||||||||||
Sbjct: 59 tctagcaccatatgaaatcagtt 81
>37717_tca-mir-29:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatatgaaatcagtt 81
|||||||||||||||||||||||
Sbjct: 75 tctagcaccatatgaaatcagtt 97
>37718_tca-mir-29:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatatgaaatcagtt 81
|||||||||||||||||||||||
Sbjct: 75 tctagcaccatatgaaatcagtt 97
>25730_xtr-mir-29d:mirbase
Length = 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 tctagcaccatatgaaatcagt 80
||||||||||||||||||||||
Sbjct: 47 tctagcaccatatgaaatcagt 68
>25454_pma-mir-29d:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 ctctagcaccatatgaaatc 77
||||||||||||||||||||
Sbjct: 51 ctctagcaccatatgaaatc 70
>34718_tni-mir-29b-1:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 53 tcatcctctagcaccatatgaaatcagt 80
||||| ||||||||||| ||||||||||
Sbjct: 42 tcatcgtctagcaccatttgaaatcagt 69
