miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35165_aae-let-7:mirbase
          Length = 71

 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||||||||||||||||||
Sbjct: 6  tgaggtagttggttgtatagtagt 29




>35269_aga-let-7:mirbase
          Length = 90

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tgaggtagttggttgtatagta 22
          ||||||||||||||||||||||
Sbjct: 15 tgaggtagttggttgtatagta 36




>36002_cqu-let-7:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  tgaggtagttggttgtatagta 22
          ||||||||||||||||||||||
Sbjct: 16 tgaggtagttggttgtatagta 37




>36151_der-let-7:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>36233_dgr-let-7-1:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>36234_dgr-let-7-2:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>36317_dme-let-7:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>36318_dme-let-7:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>36750_dmo-let-7:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>36822_dpe-let-7-1:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>36823_dpe-let-7-2:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>36898_dps-let-7:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>37110_dse-let-7:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>37189_dsi-let-7:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>37326_dvi-let-7:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>37401_dwi-let-7:mirbase
          Length = 79

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>37479_dya-let-7:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  tgaggtagttggttgtatagtagt 24
          ||||||||| ||||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtagt 34




>38718_cte-let-7:mirbase
          Length = 103

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgaggtagttggttgtatagtag 23
          ||||||||| |||||||||||||
Sbjct: 21 tgaggtagtaggttgtatagtag 43




>35337_ame-let-7:mirbase
          Length = 100

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgaggtagttggttgtatagtag 23
          ||||||||| |||||||||||||
Sbjct: 13 tgaggtagtaggttgtatagtag 35




>36074_dan-let-7:mirbase
          Length = 78

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 1  tgaggtagttggttgtatagtag 23
          ||||||||| |||||||||||||
Sbjct: 11 tgaggtagtaggttgtatagtag 33