miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35274_aga-mir-8:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 33 gatatgtctaatactgtcaggtaatgatgtc 63
||||| |||||||||||||||||| ||||||
Sbjct: 46 gatatttctaatactgtcaggtaaagatgtc 76
>37414_dwi-mir-8:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 33 gatatgtctaatactgtcaggtaatgatgtc 63
||||| |||||||||||||||||| ||||||
Sbjct: 50 gatatctctaatactgtcaggtaaagatgtc 80
>38120_bma-mir-236:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 18 attagagtgacaattgatatgtctaatactgtcaggtaatga 59
||||||||| || ||| || |||||||||||||||||||||
Sbjct: 28 attagagtgtcatatgaaatatctaatactgtcaggtaatga 69
>38851_lgi-mir-8:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 59 tctaatactgtcaggtaaagatgtc 83
>38728_cte-mir-8:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 58 tctaatactgtcaggtaaagatgtc 82
>38560_crm-mir-236:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatga 59
|||||||||||||||||||||
Sbjct: 63 tctaatactgtcaggtaatga 83
>38339_cel-mir-236:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatga 59
|||||||||||||||||||||
Sbjct: 59 tctaatactgtcaggtaatga 79
>34963_isc-mir-8:mirbase
Length = 94
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 56 tctaatactgtcaggtaaagatgtc 80
>34999_dpu-mir-8:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 59 tctaatactgtcaggtaaagatgtc 83
>35171_aae-mir-8:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 47 tctaatactgtcaggtaaagatgtc 71
>35344_ame-mir-8:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 50 tctaatactgtcaggtaaagatgtc 74
>35518_bmo-mir-8:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 58 tctaatactgtcaggtaaagatgtc 82
>36006_cqu-mir-8:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 47 tctaatactgtcaggtaaagatgtc 71
>36087_dan-mir-8:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 52 tctaatactgtcaggtaaagatgtc 76
>36165_der-mir-8:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>36253_dgr-mir-8:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 55 tctaatactgtcaggtaaagatgtc 79
>36345_dme-mir-8:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>36346_dme-mir-8:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>36763_dmo-mir-8:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 54 tctaatactgtcaggtaaagatgtc 78
>36836_dpe-mir-8:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>36912_dps-mir-8:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37125_dse-mir-8:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37203_dsi-mir-8:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37339_dvi-mir-8:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 55 tctaatactgtcaggtaaagatgtc 79
>37493_dya-mir-8:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37561_lmi-mir-8:mirbase
Length = 61
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 37 tctaatactgtcaggtaacgatgtc 61
>37602_nlo-mir-8:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37635_nvi-mir-8:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 51 tctaatactgtcaggtaaagatgtc 75
>37695_tca-mir-8:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 45 tctaatactgtcaggtaaagatgtc 69
>37696_tca-mir-8:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgtc 63
|||||||||||||||||| ||||||
Sbjct: 45 tctaatactgtcaggtaaagatgtc 69
>38211_cbr-mir-236:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatga 59
|||||||||||||||||||||
Sbjct: 59 tctaatactgtcaggtaatga 79
>34889_sko-mir-200:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatgt 62
|||||||||||| |||||||||||
Sbjct: 59 tctaatactgtctggtaatgatgt 82
>39065_sme-mir-8a:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 39 tctaatactgtcaggtaatgatg 61
|||||||||||||||||| ||||
Sbjct: 43 tctaatactgtcaggtaacgatg 65
>24693_bfl-mir-200b:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 40 ctaatactgtcaggtaatgatgt 62
||||||||||| |||||||||||
Sbjct: 58 ctaatactgtctggtaatgatgt 80
