miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38550_crm-mir-87:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 taggtgagcaaagtttcaggtgtgc 66
|||||||||||||||||||||||||
Sbjct: 61 taggtgagcaaagtttcaggtgtgc 85
>38198_cbr-mir-87:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 taggtgagcaaagtttcaggtgtgc 66
|||||||||||||||||||||||||
Sbjct: 58 taggtgagcaaagtttcaggtgtgc 82
>38327_cel-mir-87:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 taggtgagcaaagtttcaggtgtgc 66
|||||||||||||||||||||||||
Sbjct: 58 taggtgagcaaagtttcaggtgtgc 82
>38628_ppc-mir-87:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 aggtgagcaaagtttcaggtgtgc 66
||||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgtgc 82
>34968_isc-mir-87:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 taggtgagcaaagtttcaggtgtg 65
||||||||||||||||||||||||
Sbjct: 58 taggtgagcaaagtttcaggtgtg 81
>38745_cte-mir-87b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 taggtgagcaaagtttcaggtgt 64
|||||||||||||||||||||||
Sbjct: 58 taggtgagcaaagtttcaggtgt 80
>38744_cte-mir-87a:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 44 ggtgagcaaagtttcaggtgtgc 66
|||||||||||||||||||||||
Sbjct: 60 ggtgagcaaagtttcaggtgtgc 82
>35361_ame-mir-87-1:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 43 aggtgagcaaagtttcaggtgtg 65
|||||||||||||||||||||||
Sbjct: 68 aggtgagcaaagtttcaggtgtg 90
>38108_bma-mir-87a:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 42 taggtgagcaaagtttcaggtgt 64
|||||||||||||||||||||||
Sbjct: 48 taggtgagcaaagtttcaggtgt 70
>38862_lgi-mir-87:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 aggtgagcaaagtttcaggtgt 64
||||||||||||||||||||||
Sbjct: 59 aggtgagcaaagtttcaggtgt 80
>35362_ame-mir-87-2:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 ggtgagcaaagtttcaggtgtg 65
||||||||||||||||||||||
Sbjct: 69 ggtgagcaaagtttcaggtgtg 90
>37727_tca-mir-87a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 ggtgagcaaagtttcaggtgtg 65
||||||||||||||||||||||
Sbjct: 51 ggtgagcaaagtttcaggtgtg 72
>37728_tca-mir-87a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 44 ggtgagcaaagtttcaggtgtg 65
||||||||||||||||||||||
Sbjct: 51 ggtgagcaaagtttcaggtgtg 72
>38941_emu-mir-87:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 ggtgagcaaagtttcaggtgt 64
|||||||||||||||||||||
Sbjct: 72 ggtgagcaaagtttcaggtgt 92
>38918_egr-mir-87:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 44 ggtgagcaaagtttcaggtgt 64
|||||||||||||||||||||
Sbjct: 72 ggtgagcaaagtttcaggtgt 92
>37729_tca-mir-87b:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 taggtgagcaaagtttcaggtgtg 65
||||||||||||| ||||||||||
Sbjct: 55 taggtgagcaaagattcaggtgtg 78
>37730_tca-mir-87b:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 42 taggtgagcaaagtttcaggtgtg 65
||||||||||||| ||||||||||
Sbjct: 55 taggtgagcaaagattcaggtgtg 78
>35057_api-mir-87b:mirbase
Length = 63
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 43 aggtgagcaaagtttcagg 61
|||||||||||||||||||
Sbjct: 40 aggtgagcaaagtttcagg 58
>35187_aae-mir-87:mirbase
Length = 107
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 43 aggtgagcaaagtttcaggtgtg 65
||||||||||| |||||||||||
Sbjct: 64 aggtgagcaaattttcaggtgtg 86
>35534_bmo-mir-87:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 43 aggtgagcaaagtttcaggtgtg 65
||||||||||| |||||||||||
Sbjct: 59 aggtgagcaaactttcaggtgtg 81
>36017_cqu-mir-87:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 43 aggtgagcaaagtttcaggtgtg 65
||||||||||| |||||||||||
Sbjct: 47 aggtgagcaaattttcaggtgtg 69