miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36191_der-mir-263a:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 7e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggtac 28
|||||||||| |||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggtac 43
>37519_dya-mir-263a:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 7e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggtac 28
|||||||||| |||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggtac 43
>36113_dan-mir-263a:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggta 27
|||||||||| ||||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggta 41
>36405_dme-mir-263a:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggta 27
|||||||||| ||||||||||||||||
Sbjct: 18 aatggcactggaagaattcacggggta 44
>36406_dme-mir-263a:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggta 27
|||||||||| ||||||||||||||||
Sbjct: 18 aatggcactggaagaattcacggggta 44
>37151_dse-mir-263a:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggta 27
|||||||||| ||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggta 42
>37230_dsi-mir-263a:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggta 27
|||||||||| ||||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggta 42
>34978_isc-mir-263a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 21 aatggcactggaagaattcacggggt 46
>36280_dgr-mir-263a:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggt 40
>36789_dmo-mir-263a:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggt 40
>36865_dpe-mir-263a:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 16 aatggcactggaagaattcacggggt 41
>36944_dps-mir-263a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 17 aatggcactggaagaattcacggggt 42
>37105_dps-mir-3983:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 73 aatggcactggaagaattcacggggt 48
>37365_dvi-mir-263a:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggt 40
>37444_dwi-mir-263a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 15 aatggcactggaagaattcacggggt 40
>37761_tca-mir-263a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 18 aatggcactggaagaattcacggggt 43
>37762_tca-mir-263a:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggggt 26
|||||||||| |||||||||||||||
Sbjct: 18 aatggcactggaagaattcacggggt 43
>35377_ame-mir-263:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacgggg 25
|||||||||| ||||||||||||||
Sbjct: 16 aatggcactggaagaattcacgggg 40
>35019_dpu-mir-263a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggg 24
|||||||||| |||||||||||||
Sbjct: 20 aatggcactggaagaattcacggg 43
>35202_aae-mir-263a:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggg 24
|||||||||| |||||||||||||
Sbjct: 14 aatggcactggaagaattcacggg 37
>35297_aga-mir-263:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggg 24
|||||||||| |||||||||||||
Sbjct: 14 aatggcactggaagaattcacggg 37
>35545_bmo-mir-263a:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggg 24
|||||||||| |||||||||||||
Sbjct: 19 aatggcactggaagaattcacggg 42
>36030_cqu-mir-263:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aatggcactgaaagaattcacggg 24
|||||||||| |||||||||||||
Sbjct: 9 aatggcactggaagaattcacggg 32
