miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36197_der-mir-277:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 catgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||||
Sbjct: 55 catgtaaatgcactatctggtacgaca 81
>36417_dme-mir-277:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 catgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||||
Sbjct: 55 catgtaaatgcactatctggtacgaca 81
>36418_dme-mir-277:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 catgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||||
Sbjct: 55 catgtaaatgcactatctggtacgaca 81
>37157_dse-mir-277:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 catgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||||
Sbjct: 55 catgtaaatgcactatctggtacgaca 81
>37526_dya-mir-277:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 catgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||||
Sbjct: 55 catgtaaatgcactatctggtacgaca 81
>35207_aae-mir-277:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 60 tgtaaatgcactatctggtacgaca 84
>35302_aga-mir-277:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 57 tgtaaatgcactatctggtacgaca 81
>35381_ame-mir-277:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 49 tgtaaatgcactatctggtacgaca 73
>35550_bmo-mir-277:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 79 tgtaaatgcactatctggtacgaca 103
>36035_cqu-mir-277:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 61 tgtaaatgcactatctggtacgaca 85
>36119_dan-mir-277:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 57 tgtaaatgcactatctggtacgaca 81
>36286_dgr-mir-277:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 54 tgtaaatgcactatctggtacgaca 78
>36794_dmo-mir-277:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 53 tgtaaatgcactatctggtacgaca 77
>36871_dpe-mir-277:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 57 tgtaaatgcactatctggtacgaca 81
>36951_dps-mir-277:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 57 tgtaaatgcactatctggtacgaca 81
>37371_dvi-mir-277:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 54 tgtaaatgcactatctggtacgaca 78
>37450_dwi-mir-277:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 58 tgtaaatgcactatctggtacgaca 82
>37588_ngi-mir-277:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 52 tgtaaatgcactatctggtacgaca 76
>37619_nlo-mir-277:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 52 tgtaaatgcactatctggtacgaca 76
>37661_nvi-mir-277:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 52 tgtaaatgcactatctggtacgaca 76
>37769_tca-mir-277:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 51 tgtaaatgcactatctggtacgaca 75
>37770_tca-mir-277:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 tgtaaatgcactatctggtacgaca 79
|||||||||||||||||||||||||
Sbjct: 51 tgtaaatgcactatctggtacgaca 75
>37235_dsi-mir-277:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 47 ccaaatcatgtaaatgcactatctggtacgaca 79
||||| |||||||||||| ||| ||||||||||
Sbjct: 49 ccaaagcatgtaaatgcattatttggtacgaca 81
