miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35084_api-mir-307-2:mirbase
Length = 61
Score = 121 bits (61), Expect = 5e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 actcactcaatttggatgtgatgttcaaattggcgccaccacaacctccttgagtgagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actcactcaatttggatgtgatgttcaaattggcgccaccacaacctccttgagtgagcg 60
Query: 61 a 61
|
Sbjct: 61 a 61
>35220_aae-mir-307:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 59 cacaacctccttgagtgagcga 80
>35311_aga-mir-307:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>35564_bmo-mir-307:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 62 cacaacctccttgagtgagcga 83
>36136_dan-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>36214_der-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>36304_dgr-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>36449_dme-mir-307a:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>36450_dme-mir-307a:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>36451_dme-mir-307b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 49 cacaacctccttgagtgagcga 28
>36452_dme-mir-307b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 49 cacaacctccttgagtgagcga 28
>36810_dmo-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>36886_dpe-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>36968_dps-mir-307a:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>36969_dps-mir-307b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 30 cacaacctccttgagtgagcga 9
>37174_dse-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>37250_dsi-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>37387_dvi-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>37467_dwi-mir-307:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>37543_dya-mir-307:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 57 cacaacctccttgagtgagcga 78
>37567_lmi-mir-307:mirbase
Length = 61
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 40 cacaacctccttgagtgagcga 61
>37790_tca-mir-307:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 43 cacaacctccttgagtgagcga 64
>37791_tca-mir-307:mirbase
Length = 68
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgagcga 61
||||||||||||||||||||||
Sbjct: 43 cacaacctccttgagtgagcga 64
>34985_isc-mir-307:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgag 58
|||||||||||||||||||
Sbjct: 62 cacaacctccttgagtgag 80
>35030_dpu-mir-307:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 40 cacaacctccttgagtgag 58
|||||||||||||||||||
Sbjct: 62 cacaacctccttgagtgag 80