miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>37675_nvi-mir-993:mirbase
          Length = 119

 Score =  109 bits (55), Expect = 3e-25
 Identities = 75/81 (92%), Gaps = 3/81 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   cgtgatctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagctcgtc 64
           ||||||||||||||||||||||||||||||||||||  | ||||   |||||||||||||
Sbjct: 38  cgtgatctaccctgtagatccgggcttttgtagaattgtagata---tcagaagctcgtc 94

                                
Query: 65  tctacaggtatcttacggatg 85
           |||||||||||||||||||||
Sbjct: 95  tctacaggtatcttacggatg 115




>37627_nlo-mir-993:mirbase
          Length = 89

 Score =  107 bits (54), Expect = 1e-24
 Identities = 74/80 (92%), Gaps = 3/80 (3%)
 Strand = Plus / Plus

                                                                      
Query: 6  gtgatctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagctcgtct 65
          |||||||||||||||||||||||||||||||||||| | ||||   ||||||||||||||
Sbjct: 10 gtgatctaccctgtagatccgggcttttgtagaatagtagata---tcagaagctcgtct 66

                              
Query: 66 ctacaggtatcttacggatg 85
          ||||||||||||| ||||||
Sbjct: 67 ctacaggtatctttcggatg 86




>37822_tca-mir-993:mirbase
          Length = 88

 Score =  107 bits (54), Expect = 1e-24
 Identities = 81/88 (92%), Gaps = 4/88 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  catccgtgatctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagct 60
          ||||||||||||||||||||||||||||||||||||||||  |   || | |||||||||
Sbjct: 5  catccgtgatctaccctgtagatccgggcttttgtagaatttt---ta-gatcagaagct 60

                                      
Query: 61 cgtctctacaggtatcttacggatggaa 88
          ||||||||||||||||||||||||||||
Sbjct: 61 cgtctctacaggtatcttacggatggaa 88




>37823_tca-mir-993:mirbase
          Length = 88

 Score =  107 bits (54), Expect = 1e-24
 Identities = 81/88 (92%), Gaps = 4/88 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  catccgtgatctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagct 60
          ||||||||||||||||||||||||||||||||||||||||  |   || | |||||||||
Sbjct: 5  catccgtgatctaccctgtagatccgggcttttgtagaatttt---ta-gatcagaagct 60

                                      
Query: 61 cgtctctacaggtatcttacggatggaa 88
          ||||||||||||||||||||||||||||
Sbjct: 61 cgtctctacaggtatcttacggatggaa 88




>35409_ame-mir-993:mirbase
          Length = 89

 Score =  101 bits (51), Expect = 8e-23
 Identities = 74/81 (91%), Gaps = 3/81 (3%)
 Strand = Plus / Plus

                                                                      
Query: 5  cgtgatctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagctcgtc 64
          ||||||||||||||||||||||||||||||||||||  |  |||   |||||||||||||
Sbjct: 9  cgtgatctaccctgtagatccgggcttttgtagaattgtaaata---tcagaagctcgtc 65

                               
Query: 65 tctacaggtatcttacggatg 85
          |||||||||||||||||||||
Sbjct: 66 tctacaggtatcttacggatg 86




>37597_ngi-mir-993:mirbase
          Length = 85

 Score = 85.7 bits (43), Expect = 5e-18
 Identities = 74/81 (91%), Gaps = 5/81 (6%)
 Strand = Plus / Plus

                                                                      
Query: 5  cgtgatctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagctcgtc 64
          |||||||||||||||||||||||||||| |||||||  | |||||   ||||||||||||
Sbjct: 7  cgtgatctaccctgtagatccgggcttt-gtagaatg-tagatat---cagaagctcgtc 61

                               
Query: 65 tctacaggtatcttacggatg 85
          |||||||||||||||||||||
Sbjct: 62 tctacaggtatcttacggatg 82




>35578_bmo-mir-993a:mirbase
          Length = 88

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 75/84 (89%), Gaps = 4/84 (4%)
 Strand = Plus / Plus

                                                                      
Query: 5  cgtgatctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagctcgtc 64
          |||||||||||||||||||||||||||||||||| ||||   ||   |||||||||||||
Sbjct: 9  cgtgatctaccctgtagatccgggcttttgtagattaat---ta-catcagaagctcgtc 64

                                  
Query: 65 tctacaggtatcttacggatggaa 88
          ||||||||||||| |||| |||||
Sbjct: 65 tctacaggtatctcacggctggaa 88




>34990_isc-mir-993:mirbase
          Length = 92

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 61/70 (87%), Gaps = 1/70 (1%)
 Strand = Plus / Plus

                                                                      
Query: 9  atctaccctgtagatccgggcttttgtagaataatcgatatgttcagaagctcgtctcta 68
          |||||||||||||| ||||||||||||||| | | |||    ||||||||||||| ||||
Sbjct: 16 atctaccctgtagaaccgggcttttgtagact-agcgaccctttcagaagctcgtttcta 74

                    
Query: 69 caggtatctt 78
          ||||||||||
Sbjct: 75 caggtatctt 84




>35579_bmo-mir-993b:mirbase
          Length = 119

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 5  cgtgatctaccctgtagatccgggcttt 32
          ||||||||||||||||||||||||||||
Sbjct: 9  cgtgatctaccctgtagatccgggcttt 36



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 aagctcgtctctacaggtat 75
          ||||||||||||||||||||
Sbjct: 54 aagctcgtctctacaggtat 73




>35037_dpu-mir-993:mirbase
          Length = 101

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 52 tcagaagctcgtctctacaggtatcttacgg 82
          |||||||||||| ||||||||||||||||||
Sbjct: 58 tcagaagctcgtttctacaggtatcttacgg 88



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 12 taccctgtagatccgggcttttgt 35
          |||||||||| |||||||||||||
Sbjct: 20 taccctgtagctccgggcttttgt 43




>36563_dme-mir-993:mirbase
          Length = 119

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  tcagaagctcgtctctacaggtatct 77
           ||||||||||||||||||||||||||
Sbjct: 82  tcagaagctcgtctctacaggtatct 107



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 4  ccgtgatctaccctgtagatccgggcttttgt 35
          |||||| ||||||||||| |||||||||||||
Sbjct: 8  ccgtgacctaccctgtagttccgggcttttgt 39




>36564_dme-mir-993:mirbase
          Length = 119

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  tcagaagctcgtctctacaggtatct 77
           ||||||||||||||||||||||||||
Sbjct: 82  tcagaagctcgtctctacaggtatct 107



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 4  ccgtgatctaccctgtagatccgggcttttgt 35
          |||||| ||||||||||| |||||||||||||
Sbjct: 8  ccgtgacctaccctgtagttccgggcttttgt 39




>36997_dps-mir-993:mirbase
          Length = 114

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  tcagaagctcgtctctacaggtatct 77
           ||||||||||||||||||||||||||
Sbjct: 78  tcagaagctcgtctctacaggtatct 103



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 4  ccgtgatctaccctgtagatccgggcttttgt 35
          |||||| ||||||||||| |||||||||||||
Sbjct: 4  ccgtgacctaccctgtagttccgggcttttgt 35




>37298_dsi-mir-993:mirbase
          Length = 114

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 52  tcagaagctcgtctctacaggtatct 77
           ||||||||||||||||||||||||||
Sbjct: 78  tcagaagctcgtctctacaggtatct 103



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 4  ccgtgatctaccctgtagatccgggcttttgt 35
          |||||| ||||||||||| |||||||||||||
Sbjct: 4  ccgtgacctaccctgtagttccgggcttttgt 35




>35241_aae-mir-993:mirbase
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 3  tccgtgatctaccctgtagatccgggcttttgt 35
          ||||||| ||||||||||| |||||||||||||
Sbjct: 9  tccgtgacctaccctgtagttccgggcttttgt 41




>35327_aga-mir-993:mirbase
          Length = 120

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 3  tccgtgatctaccctgtagatccgggcttttgt 35
          ||||||| ||||||||||| |||||||||||||
Sbjct: 9  tccgtgacctaccctgtagttccgggcttttgt 41




>36057_cqu-mir-993:mirbase
          Length = 99

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 3  tccgtgatctaccctgtagatccgggcttttgt 35
          ||||||| ||||||||||| |||||||||||||
Sbjct: 9  tccgtgacctaccctgtagttccgggcttttgt 41