miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35415_ame-mir-2796:mirbase
          Length = 128

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 40 ttgtaggccggcggaaactact 61
          ||||||||||||||||||||||
Sbjct: 69 ttgtaggccggcggaaactact 90





>37836_tca-mir-2796:mirbase
          Length = 158

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 40  ttgtaggccggcggaaactact 61
           ||||||||||||||||||||||
Sbjct: 85  ttgtaggccggcggaaactact 106





>37837_tca-mir-2796:mirbase
          Length = 158

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 40  ttgtaggccggcggaaactact 61
           ||||||||||||||||||||||
Sbjct: 85  ttgtaggccggcggaaactact 106





>35680_bmo-mir-2796:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 41 tgtaggccggcggaaactact 61
          |||||||||||||||||||||
Sbjct: 46 tgtaggccggcggaaactact 66





>35681_bmo-mir-2796:mirbase
          Length = 79

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 41 tgtaggccggcggaaactact 61
          |||||||||||||||||||||
Sbjct: 46 tgtaggccggcggaaactact 66





>37676_nvi-mir-2796:mirbase
          Length = 85

 Score = 42.1 bits (21), Expect = 4e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 41 tgtaggccggcggaaactact 61
          |||||||||||||||||||||
Sbjct: 50 tgtaggccggcggaaactact 70