miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37516_dya-mir-184:mirbase
Length = 87
Score = 81.8 bits (41), Expect = 7e-17
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctttcta-acaactggacggag 59
|||||| ||| |||||||||||||| ||||||||||||| || | ||||||||||||||
Sbjct: 3 ggtgcattcgtacccttatcattctctcgccccgtgtgcattgaagacaactggacggag 62
Query: 60 aactgataagggc 72
|||||||||||||
Sbjct: 63 aactgataagggc 75
>36188_der-mir-184:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctttcta--acaactggacgga 58
|||||| ||| |||||||||||||| ||||||||||||| || | |||||||||||||
Sbjct: 3 ggtgcattcgtacccttatcattctctcgccccgtgtgcatttaaagacaactggacgga 62
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 63 gaactgataagggc 76
>37148_dse-mir-184:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctttcta--acaactggacgga 58
|||||| ||| |||||||||||||| ||||||||||||| || | |||||||||||||
Sbjct: 3 ggtgcattcgtacccttatcattctctcgccccgtgtgcatttaaagacaactggacgga 62
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 63 gaactgataagggc 76
>37224_dsi-mir-184:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctttcta--acaactggacgga 58
|||||| ||| |||||||||||||| ||||||||||||| || | |||||||||||||
Sbjct: 3 ggtgcattcgtacccttatcattctctcgccccgtgtgcatttaaagacaactggacgga 62
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 63 gaactgataagggc 76
>36025_cqu-mir-184:mirbase
Length = 85
Score = 75.8 bits (38), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 12 acccttatcattctttcgccccgtgtgctttc--taacaactggacggagaactgataag 69
|||||||||||||||||||||||||| || | | | |||||||||||||||||||||
Sbjct: 11 acccttatcattctttcgccccgtgtactgttgtttgcgactggacggagaactgataag 70
Query: 70 ggcccgggtcacc 82
|||||||||||||
Sbjct: 71 ggcccgggtcacc 83
>36786_dmo-mir-184:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 4e-15
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctt-tcta-acaactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| | |||| |||||||||||||
Sbjct: 7 ggtgcattcgtacccttatcattctcgcgccccgtgtgcatatctatacaactggacgga 66
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 67 gaactgataagggc 80
>37362_dvi-mir-184:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 4e-15
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctt-tcta-acaactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| | |||| |||||||||||||
Sbjct: 7 ggtgcattcgtacccttatcattctcgcgccccgtgtgcatatctagacaactggacgga 66
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 67 gaactgataagggc 80
>37441_dwi-mir-184:mirbase
Length = 88
Score = 75.8 bits (38), Expect = 4e-15
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctt-tcta-acaactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| | |||| |||||||||||||
Sbjct: 3 ggtgcattcgtacccttatcattctcgcgccccgtgtgcatatctagacaactggacgga 62
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 63 gaactgataagggc 76
>36393_dme-mir-184:mirbase
Length = 100
Score = 69.9 bits (35), Expect = 3e-13
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtg--ctttctaacaactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| ||| |||||||||||||
Sbjct: 9 ggtgcattcgtacccttatcattctctcgccccgtgtgcacttaaagacaactggacgga 68
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 69 gaactgataagggc 82
>36394_dme-mir-184:mirbase
Length = 100
Score = 69.9 bits (35), Expect = 3e-13
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtg--ctttctaacaactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| ||| |||||||||||||
Sbjct: 9 ggtgcattcgtacccttatcattctctcgccccgtgtgcacttaaagacaactggacgga 68
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 69 gaactgataagggc 82
>36862_dpe-mir-184:mirbase
Length = 88
Score = 69.9 bits (35), Expect = 3e-13
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctttctaa--caactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| || || ||||||||||||
Sbjct: 3 ggtgcattcgtacccttatcattctcgcgccccgtgtgcattaaaagacaactggacgga 62
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 63 gaactgataagggc 76
>36937_dps-mir-184:mirbase
Length = 100
Score = 69.9 bits (35), Expect = 3e-13
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctttctaa--caactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| || || ||||||||||||
Sbjct: 9 ggtgcattcgtacccttatcattctcgcgccccgtgtgcattaaaagacaactggacgga 68
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 69 gaactgataagggc 82
>35196_aae-mir-184:mirbase
Length = 88
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgataagggcccgggtcacc 82
||||||||||||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggcccgggtcacc 86
>36277_dgr-mir-184:mirbase
Length = 88
Score = 67.9 bits (34), Expect = 1e-12
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgcttt-cta-acaactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| | ||| |||||||||||||
Sbjct: 3 ggtgcattcgtacccttatcattctctcgccccgtgtggataactatacaactggacgga 62
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 63 gaactgataagggc 76
>36110_dan-mir-184:mirbase
Length = 88
Score = 61.9 bits (31), Expect = 6e-11
Identities = 64/74 (86%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 1 ggtgcactcgaacccttatcattctttcgccccgtgtgctttctaa--caactggacgga 58
|||||| ||| |||||||||||||| |||||||||||| | | | ||||||||||||
Sbjct: 3 ggtgcattcgtacccttatcattctcgcgccccgtgtgcataatgagacaactggacgga 62
Query: 59 gaactgataagggc 72
||||||||||||||
Sbjct: 63 gaactgataagggc 76
>37747_tca-mir-184:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 44 taacaactggacggagaactgataagggc 72
|||||||||||||||||||||||||||||
Sbjct: 42 taacaactggacggagaactgataagggc 70
>37748_tca-mir-184:mirbase
Length = 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 44 taacaactggacggagaactgataagggc 72
|||||||||||||||||||||||||||||
Sbjct: 42 taacaactggacggagaactgataagggc 70
>35065_api-mir-184a:mirbase
Length = 65
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 45 aacaactggacggagaactgataagggc 72
||||||||||||||||||||||||||||
Sbjct: 32 aacaactggacggagaactgataagggc 59
>35371_ame-mir-184:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgataagggcccg 75
|||||||||||||||||||||||||||
Sbjct: 54 actggacggagaactgataagggcccg 80
>37581_ngi-mir-184:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgataagggcccg 75
|||||||||||||||||||||||||||
Sbjct: 52 actggacggagaactgataagggcccg 78
>37613_nlo-mir-184:mirbase
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgataagggcccg 75
|||||||||||||||||||||||||||
Sbjct: 52 actggacggagaactgataagggcccg 78
>37653_nvi-mir-184:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgataagggcccg 75
|||||||||||||||||||||||||||
Sbjct: 54 actggacggagaactgataagggcccg 80
>24688_bfl-mir-184:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 50 ctggacggagaactgataagggcccg 75
||||||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggcccg 85
>38873_lgi-mir-184:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 48 aactggacggagaactgataagggc 72
|||||||||||||||||||||||||
Sbjct: 58 aactggacggagaactgataagggc 82
>38757_cte-mir-184a:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgataagggcc 73
|||||||||||||||||||||||||
Sbjct: 59 actggacggagaactgataagggcc 83
>35541_bmo-mir-184:mirbase
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgataagggc 72
||||||||||||||||||||||||
Sbjct: 50 actggacggagaactgataagggc 73
>34829_spu-mir-184:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 ctggacggagaactgataagggc 72
|||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82
>34885_sko-mir-184:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 ctggacggagaactgataagggc 72
|||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82
>34975_isc-mir-184:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 50 ctggacggagaactgataagggc 72
|||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82
>24844_cin-mir-184:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataagggc 72
||||||||||||||||||||||
Sbjct: 66 tggacggagaactgataagggc 87
>34335_dre-mir-184:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataagggc 72
||||||||||||||||||||||
Sbjct: 55 tggacggagaactgataagggc 76
>34336_dre-mir-184-2:mirbase
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataagggc 72
||||||||||||||||||||||
Sbjct: 49 tggacggagaactgataagggc 70
>25979_gga-mir-184:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>26487_tgu-mir-184:mirbase
Length = 112
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 81 tggacggagaactgataaggg 101
>26739_cfa-mir-184:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 42 tggacggagaactgataaggg 62
>27065_eca-mir-184:mirbase
Length = 70
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 46 tggacggagaactgataaggg 66
>27408_mdo-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>27775_mml-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>28225_mne-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>28491_hsa-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>30259_ptr-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>30873_ppy-mir-184:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>31900_mmu-mir-184:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 45 tggacggagaactgataaggg 65
>32770_rno-mir-184:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 47 tggacggagaactgataaggg 67
>33252_bta-mir-184:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>34014_ssc-mir-184:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72
>34616_fru-mir-184:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>34763_tni-mir-184:mirbase
Length = 73
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataaggg 71
|||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73
>25809_xtr-mir-184:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 51 tggacggagaactgataagg 70
||||||||||||||||||||
Sbjct: 53 tggacggagaactgataagg 72
>35066_api-mir-184b:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgataa 68
||||||||||||||||||||
Sbjct: 37 actggacggagaactgataa 56
>38758_cte-mir-184b:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 actggacggagaactgata 67
|||||||||||||||||||
Sbjct: 56 actggacggagaactgata 74
