miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35203_aae-mir-263b:mirbase
Length = 91
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 2 gaccaattatggaccttggcactgggagaattcacag 38
||||||||| | |||||||||||||||||||||||||
Sbjct: 1 gaccaattacgaaccttggcactgggagaattcacag 37
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 57 ttctgtggatcttttcgtgccatcgtt 83
|||||||||||||||||||||||||||
Sbjct: 54 ttctgtggatcttttcgtgccatcgtt 80
>35546_bmo-mir-263b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 ccttggcactgggagaattcacag 38
||||||||||||||||||||||||
Sbjct: 14 ccttggcactgggagaattcacag 37
>36114_dan-mir-263b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacagt 38
>36192_der-mir-263b:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>36281_dgr-mir-263b:mirbase
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 9 cttggcactgggagaattcacagt 32
>36407_dme-mir-263b:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>36408_dme-mir-263b:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>36866_dpe-mir-263b:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>36945_dps-mir-263b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>37152_dse-mir-263b:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>37231_dsi-mir-263b:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>37366_dvi-mir-263b:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 6 cttggcactgggagaattcacagt 29
>37445_dwi-mir-263b:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 3 cttggcactgggagaattcacagt 26
>37520_dya-mir-263b-1:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacagt 38
>37521_dya-mir-263b-2:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 cttggcactgggagaattcacagt 39
||||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacagt 38
>37764_tca-mir-263b:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 14 accttggcactgggagaattcacag 38
||||||||||||| |||||||||||
Sbjct: 8 accttggcactggaagaattcacag 32
>37763_tca-mir-263b:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 14 accttggcactgggagaattcacag 38
||||||||||||| |||||||||||
Sbjct: 8 accttggcactggaagaattcacag 32
>35020_dpu-mir-263b:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 ccttggcactgggagaattcacag 38
|||||||||||| |||||||||||
Sbjct: 6 ccttggcactggaagaattcacag 29
