miRNEST 2.0, an integrative microRNA resource :: BLAST
>36031_cqu-mir-275:mirbase
Length = 101
Score = 105 bits (53), Expect = 6e-24
Identities = 64/67 (95%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 18 cgcgctaagcaggaaccgggacttggtacacattcgctagcagtcaggtacctgaagtag 77
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 22 cgcgctaagcaggaaccgggacttggt---cattcgctagcagtcaggtacctgaagtag 78
Query: 78 cgcgcgt 84
|||||||
Sbjct: 79 cgcgcgt 85
>35204_aae-mir-275:mirbase
Length = 83
Score = 81.8 bits (41), Expect = 8e-17
Identities = 61/67 (91%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 18 cgcgctaagcaggaaccgggacttggtacacattcgctagcagtcaggtacctgaagtag 77
|||||||||||||||||| ||||| || |||| |||||||||||||||||||||||||
Sbjct: 16 cgcgctaagcaggaaccgagactttgt---catttgctagcagtcaggtacctgaagtag 72
Query: 78 cgcgcgt 84
|||||||
Sbjct: 73 cgcgcgt 79
>36868_dpe-mir-275:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 57 gcagtcaggtacctgaagtagcgcgcgt 84
||||||||||||||||||||||||||||
Sbjct: 51 gcagtcaggtacctgaagtagcgcgcgt 78
>36947_dps-mir-275:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 57 gcagtcaggtacctgaagtagcgcgcgt 84
||||||||||||||||||||||||||||
Sbjct: 52 gcagtcaggtacctgaagtagcgcgcgt 79
>36116_dan-mir-275:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 49 cagtcaggtacctgaagtagcgcgcgt 75
>36194_der-mir-275:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 52 cagtcaggtacctgaagtagcgcgcgt 78
>36283_dgr-mir-275:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 53 cagtcaggtacctgaagtagcgcgcgt 79
>36411_dme-mir-275:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 56 cagtcaggtacctgaagtagcgcgcgt 82
>36412_dme-mir-275:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 56 cagtcaggtacctgaagtagcgcgcgt 82
>36791_dmo-mir-275:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 53 cagtcaggtacctgaagtagcgcgcgt 79
>37154_dse-mir-275:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 52 cagtcaggtacctgaagtagcgcgcgt 78
>37232_dsi-mir-275:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 52 cagtcaggtacctgaagtagcgcgcgt 78
>37368_dvi-mir-275:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 53 cagtcaggtacctgaagtagcgcgcgt 79
>37447_dwi-mir-275:mirbase
Length = 93
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 55 cagtcaggtacctgaagtagcgcgcgt 81
>37523_dya-mir-275:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcgt 84
|||||||||||||||||||||||||||
Sbjct: 52 cagtcaggtacctgaagtagcgcgcgt 78
>35379_ame-mir-275:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 cagtcaggtacctgaagtagcgcgcg 83
||||||||||||||||||||||||||
Sbjct: 64 cagtcaggtacctgaagtagcgcgcg 89
>34979_isc-mir-275:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcgcg 83
|||||||||||||||||||||||||
Sbjct: 59 agtcaggtacctgaagtagcgcgcg 83
>35021_dpu-mir-275:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcgcg 83
|||||||||||||||||||||||||
Sbjct: 59 agtcaggtacctgaagtagcgcgcg 83
>35548_bmo-mir-275:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcgcg 83
|||||||||||||||||||||||||
Sbjct: 49 agtcaggtacctgaagtagcgcgcg 73
>37586_ngi-mir-275:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcgcg 83
|||||||||||||||||||||||||
Sbjct: 42 agtcaggtacctgaagtagcgcgcg 66
>37617_nlo-mir-275:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcgcg 83
|||||||||||||||||||||||||
Sbjct: 42 agtcaggtacctgaagtagcgcgcg 66
>37659_nvi-mir-275:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcgcg 83
|||||||||||||||||||||||||
Sbjct: 59 agtcaggtacctgaagtagcgcgcg 83
>37765_tca-mir-275:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcgcg 83
|||||||||||||||||||||||||
Sbjct: 43 agtcaggtacctgaagtagcgcgcg 67
>37766_tca-mir-275:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcgcg 83
|||||||||||||||||||||||||
Sbjct: 43 agtcaggtacctgaagtagcgcgcg 67
>35075_api-mir-275:mirbase
Length = 62
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 agtcaggtacctgaagtagcgcg 81
|||||||||||||||||||||||
Sbjct: 40 agtcaggtacctgaagtagcgcg 62
