miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35211_aae-mir-282-1:mirbase
Length = 135
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 ccagacatagcctgtcagaggttaggtgaaatctg 88
|||||||||||||| ||||||||||||||||||||
Sbjct: 81 ccagacatagcctgacagaggttaggtgaaatctg 115
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 taatctagcctcttctaggctttgtctgt 39
||||||||||||| |||||||||||||||
Sbjct: 28 taatctagcctctcctaggctttgtctgt 56
>35212_aae-mir-282-2:mirbase
Length = 135
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 ccagacatagcctgtcagaggttaggtgaaatctg 88
|||||||||||||| ||||||||||||||||||||
Sbjct: 81 ccagacatagcctgacagaggttaggtgaaatctg 115
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 taatctagcctcttctaggctttgtctgt 39
||||||||||||| |||||||||||||||
Sbjct: 28 taatctagcctctcctaggctttgtctgt 56
>36203_der-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>36292_dgr-mir-282:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 10 aatctagcctctactaggctttgtctgt 37
>36428_dme-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>36429_dme-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>36800_dmo-mir-282:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 11 aatctagcctctactaggctttgtctgt 38
>36877_dpe-mir-282:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 10 aatctagcctctactaggctttgtctgt 37
>36957_dps-mir-282:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 10 aatctagcctctactaggctttgtctgt 37
>37163_dse-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>37239_dsi-mir-282:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>37377_dvi-mir-282:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 13 aatctagcctctactaggctttgtctgt 40
>37456_dwi-mir-282:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 11 aatctagcctctactaggctttgtctgt 38
>37532_dya-mir-282:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 12 aatctagcctcttctaggctttgtctgt 39
|||||||||||| |||||||||||||||
Sbjct: 10 aatctagcctctactaggctttgtctgt 37
>36125_dan-mir-282:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 atctagcctcttctaggctttgtctgt 39
||||||||||| |||||||||||||||
Sbjct: 11 atctagcctctactaggctttgtctgt 37
>35387_ame-mir-282:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 tagcctcttctaggctttgtctgta 40
|||||||| ||||||||||||||||
Sbjct: 19 tagcctctcctaggctttgtctgta 43
>37621_nlo-mir-282:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tagcctcttctaggctttgtctgt 39
|||||||| |||||||||||||||
Sbjct: 6 tagcctctcctaggctttgtctgt 29
>37664_nvi-mir-282:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tagcctcttctaggctttgtctgt 39
|||||||| |||||||||||||||
Sbjct: 19 tagcctctcctaggctttgtctgt 42
>37783_tca-mir-282:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tagcctcttctaggctttgtctgt 39
|||||||| |||||||||||||||
Sbjct: 9 tagcctctcctaggctttgtctgt 32
>37784_tca-mir-282:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 tagcctcttctaggctttgtctgt 39
|||||||| |||||||||||||||
Sbjct: 9 tagcctctcctaggctttgtctgt 32
