miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>35215_aae-mir-286a:mirbase
          Length = 97

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 58 tagtgactagaccgaacactcgcgtcctaaa 88
          |||||||||||||||||||||||||||||||
Sbjct: 60 tagtgactagaccgaacactcgcgtcctaaa 90



 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 7  atttggggcgattgtcggactagtcgctg 35
          |||||||||||||||||||||||||||||
Sbjct: 7  atttggggcgattgtcggactagtcgctg 35




>35216_aae-mir-286b-1:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 58 tagtgactagaccgaacactcg 79
          ||||||||||||||||||||||
Sbjct: 63 tagtgactagaccgaacactcg 84




>35217_aae-mir-286b-2:mirbase
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 58 tagtgactagaccgaacactcg 79
          ||||||||||||||||||||||
Sbjct: 63 tagtgactagaccgaacactcg 84




>36129_dan-mir-286:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 67 agtgactagaccgaacactcg 87




>36207_der-mir-286:mirbase
          Length = 98

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 62 agtgactagaccgaacactcg 82




>36296_dgr-mir-286-1:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 68 agtgactagaccgaacactcg 88




>36297_dgr-mir-286-2:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 68 agtgactagaccgaacactcg 88




>36436_dme-mir-286:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 63 agtgactagaccgaacactcg 83




>36437_dme-mir-286:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 63 agtgactagaccgaacactcg 83




>36804_dmo-mir-286:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 67 agtgactagaccgaacactcg 87




>36880_dpe-mir-286:mirbase
          Length = 96

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 60 agtgactagaccgaacactcg 80




>36961_dps-mir-286:mirbase
          Length = 97

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 60 agtgactagaccgaacactcg 80




>37167_dse-mir-286:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 63 agtgactagaccgaacactcg 83




>37243_dsi-mir-286:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcg 84




>37381_dvi-mir-286:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 65 agtgactagaccgaacactcg 85




>37460_dwi-mir-286:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 74 agtgactagaccgaacactcg 94




>37536_dya-mir-286:mirbase
          Length = 98

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 59 agtgactagaccgaacactcg 79
          |||||||||||||||||||||
Sbjct: 62 agtgactagaccgaacactcg 82