miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>35218_aae-mir-305:mirbase
          Length = 88

 Score = 93.7 bits (47), Expect = 2e-20
 Identities = 77/86 (89%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                      
Query: 3  tgtcacatgtctattgtacttcatcaggtgctctggtggatttgagaaaacccggcacat 62
          ||||||||||||||||||||||||||||||||||||| | |||    | |||||||||||
Sbjct: 3  tgtcacatgtctattgtacttcatcaggtgctctggttgtttt--cgatacccggcacat 60

                                    
Query: 63 gttggagtacactctatgtgctgaca 88
          |||||||||||||  |||||||||||
Sbjct: 61 gttggagtacacttaatgtgctgaca 86




>36041_cqu-mir-305:mirbase
          Length = 88

 Score = 93.7 bits (47), Expect = 2e-20
 Identities = 77/86 (89%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                      
Query: 3  tgtcacatgtctattgtacttcatcaggtgctctggtggatttgagaaaacccggcacat 62
          ||||||||||||||||||||||||||||||||||||| | |||    | |||||||||||
Sbjct: 3  tgtcacatgtctattgtacttcatcaggtgctctggttgcttt--cgatacccggcacat 60

                                    
Query: 63 gttggagtacactctatgtgctgaca 88
          |||||||||||||  |||||||||||
Sbjct: 61 gttggagtacacttaatgtgctgaca 86




>36808_dmo-mir-305:mirbase
          Length = 73

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 62/69 (89%), Gaps = 2/69 (2%)
 Strand = Plus / Plus

                                                                      
Query: 8  catgtctattgtacttcatcaggtgctctggtggatttgagaaaacccggcacatgttgg 67
          |||||||||||||||||||||||||||||||||  |  | | ||||||||||||||||| 
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg--tcagtggaaacccggcacatgttga 58

                   
Query: 68 agtacactc 76
          |||||||||
Sbjct: 59 agtacactc 67




>37385_dvi-mir-305:mirbase
          Length = 73

 Score = 71.9 bits (36), Expect = 7e-14
 Identities = 63/70 (90%), Gaps = 4/70 (5%)
 Strand = Plus / Plus

                                                                      
Query: 8  catgtctattgtacttcatcaggtgctctggtg-gatttgagaaaacccggcacatgttg 66
          ||||||||||||||||||||||||||||||||| || |||    ||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtgtgacttg---taacccggcacatgttg 57

                    
Query: 67 gagtacactc 76
           |||||||||
Sbjct: 58 aagtacactc 67




>37788_tca-mir-305:mirbase
          Length = 75

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 6  cacatgtctattgtacttcatcaggtgctctggt 39
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  cacatgtctattgtacttcatcaggtgctctggt 34




>37789_tca-mir-305:mirbase
          Length = 75

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 6  cacatgtctattgtacttcatcaggtgctctggt 39
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  cacatgtctattgtacttcatcaggtgctctggt 34




>36134_dan-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>36212_der-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>36302_dgr-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>36445_dme-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>36446_dme-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>36884_dpe-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>36966_dps-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>37172_dse-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>37464_dwi-mir-305:mirbase
          Length = 74

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>37541_dya-mir-305:mirbase
          Length = 73

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          |||||||||||||||||||||||||||||||||
Sbjct: 1  catgtctattgtacttcatcaggtgctctggtg 33




>35389_ame-mir-305:mirbase
          Length = 90

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 attgtacttcatcaggtgctctggtg 40
          ||||||||||||||||||||||||||
Sbjct: 16 attgtacttcatcaggtgctctggtg 41




>35561_bmo-mir-305:mirbase
          Length = 91

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 attgtacttcatcaggtgctctggtg 40
          ||||||||||||||||||||||||||
Sbjct: 17 attgtacttcatcaggtgctctggtg 42




>37591_ngi-mir-305:mirbase
          Length = 88

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 attgtacttcatcaggtgctctggtg 40
          ||||||||||||||||||||||||||
Sbjct: 16 attgtacttcatcaggtgctctggtg 41




>37622_nlo-mir-305:mirbase
          Length = 88

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 attgtacttcatcaggtgctctggtg 40
          ||||||||||||||||||||||||||
Sbjct: 16 attgtacttcatcaggtgctctggtg 41




>37666_nvi-mir-305:mirbase
          Length = 90

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 attgtacttcatcaggtgctctggtg 40
          ||||||||||||||||||||||||||
Sbjct: 16 attgtacttcatcaggtgctctggtg 41




>37249_dsi-mir-305:mirbase
          Length = 72

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 32/33 (96%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                           
Query: 8  catgtctattgtacttcatcaggtgctctggtg 40
          ||||||||||||||||||||| |||||||||||
Sbjct: 1  catgtctattgtacttcatca-gtgctctggtg 32




>34984_isc-mir-305:mirbase
          Length = 90

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 15 attgtacttcatcaggtgctctgg 38
          ||||||||||||||||||||||||
Sbjct: 14 attgtacttcatcaggtgctctgg 37