miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35321_aga-mir-965-1:mirbase
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 cgaagtaaatcgacgaattctgaaaggggaatgctgtacactctatgtgctaaaaatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaagtaaatcgacgaattctgaaaggggaatgctgtacactctatgtgctaaaaatatc 60
Query: 61 cataagcgtatagcttttcccatttagcgttcgttgcgagcaaa 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cataagcgtatagcttttcccatttagcgttcgttgcgagcaaa 104
>35235_aae-mir-965:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 atccataagcgtatagcttttcccatt 84
|||||||||||||||||||||||||||
Sbjct: 47 atccataagcgtatagcttttcccatt 73
>36051_cqu-mir-965:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 60 ccataagcgtatagcttttcccatttagcgt 90
||||||||||||||||||||||||| |||||
Sbjct: 55 ccataagcgtatagcttttcccattcagcgt 85
>36505_dme-mir-965:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 atatccataagcgtatagcttttccc 81
|||| |||||||||||||||||||||
Sbjct: 59 atattcataagcgtatagcttttccc 84
>36506_dme-mir-965:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 atatccataagcgtatagcttttccc 81
|||| |||||||||||||||||||||
Sbjct: 59 atattcataagcgtatagcttttccc 84
>35574_bmo-mir-965:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 61 cataagcgtatagcttttccc 81
>36986_dps-mir-965:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 55 cataagcgtatagcttttccc 75
>37275_dsi-mir-965:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 55 cataagcgtatagcttttccc 75
>37813_tca-mir-965:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 61 cataagcgtatagcttttccc 81
>37814_tca-mir-965:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 cataagcgtatagcttttccc 81
|||||||||||||||||||||
Sbjct: 61 cataagcgtatagcttttccc 81
