miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37640_nvi-mir-13b:mirbase
Length = 92
Score = 91.7 bits (46), Expect = 7e-20
Identities = 72/79 (91%), Gaps = 5/79 (6%)
Strand = Plus / Plus
Query: 1 gcgatccaatcgtcaaattggttgtggcgtgttgcttttctaga-tttcatatcacagcc 59
||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 6 gcgatccgatcgtcaaattggttgtggcgtgttg----tctagattttcatatcacagcc 61
Query: 60 atttttgacgatttggatc 78
||||||||||| |||||||
Sbjct: 62 atttttgacgagttggatc 80
>35527_bmo-mir-13b:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 47 tcatatcacagccatttttgacgatttgg 75
|||||||||||||||||||||||| ||||
Sbjct: 45 tcatatcacagccatttttgacgagttgg 73
>35180_aae-mir-13:mirbase
Length = 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 50 ttcatatcacagccatttt 68
>35281_aga-mir-13b:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 52 ttcatatcacagccatttt 70
>36011_cqu-mir-13:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 51 ttcatatcacagccatttt 69
>36174_der-mir-13b-2:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 40 ttcatatcacagccatttt 58
>36262_dgr-mir-13b-2:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 45 ttcatatcacagccatttt 63
>36363_dme-mir-13b-2:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 42 ttcatatcacagccatttt 60
>36364_dme-mir-13b-2:mirbase
Length = 70
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 42 ttcatatcacagccatttt 60
>37134_dse-mir-13b-2:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 40 ttcatatcacagccatttt 58
>37210_dsi-mir-13b-2:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 40 ttcatatcacagccatttt 58
>37348_dvi-mir-13b-2:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 45 ttcatatcacagccatttt 63
>37424_dwi-mir-13b-1:mirbase
Length = 71
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 42 ttcatatcacagccatttt 60
>37425_dwi-mir-13b-2:mirbase
Length = 67
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 40 ttcatatcacagccatttt 58
>37502_dya-mir-13b-2:mirbase
Length = 68
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 ttcatatcacagccatttt 64
|||||||||||||||||||
Sbjct: 40 ttcatatcacagccatttt 58
