miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37644_nvi-mir-33:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatgaa 55
|||||||||||||||||||||||||
Sbjct: 31 gtgcattgtagttgcattgcatgaa 55
>38738_cte-mir-33:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 21 gtgcattgtagttgcattgcatg 43
>24657_bfl-mir-33-1:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 7 gtgcattgtagttgcattgcatg 29
>24658_bfl-mir-33-2:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 16 gtgcattgtagttgcattgcatg 38
>25740_xtr-mir-33a:mirbase
Length = 68
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>25924_gga-mir-33:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>26431_tgu-mir-33:mirbase
Length = 70
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 11 gtgcattgtagttgcattgcatg 33
>26661_cfa-mir-33:mirbase
Length = 61
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 1 gtgcattgtagttgcattgcatg 23
>26982_eca-mir-33a:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>27689_mml-mir-33a:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>28196_mne-mir-33:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>28284_ggo-mir-33:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>28399_hsa-mir-33a:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>30071_ppa-mir-33:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>30185_ptr-mir-33a:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>30789_ppy-mir-33:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>31458_oan-mir-33a:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 22 gtgcattgtagttgcattgcatg 44
>31459_oan-mir-33a:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 22 gtgcattgtagttgcattgcatg 44
>31814_mmu-mir-33:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>32696_rno-mir-33:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>33173_bta-mir-33a:mirbase
Length = 69
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 6 gtgcattgtagttgcattgcatg 28
>37721_tca-mir-33:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 25 gtgcattgtagttgcattgcatg 47
>37722_tca-mir-33:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcatg 53
|||||||||||||||||||||||
Sbjct: 25 gtgcattgtagttgcattgcatg 47
>38857_lgi-mir-33:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgcat 52
||||||||||||||||||||||
Sbjct: 21 gtgcattgtagttgcattgcat 42
>24815_cin-mir-33:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tgtgcattgtagttgcattgca 51
||||||||||||||||||||||
Sbjct: 15 tgtgcattgtagttgcattgca 36
>35004_dpu-mir-33:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 30 tgtgcattgtagttgcattgca 51
||||||||||||||||||||||
Sbjct: 20 tgtgcattgtagttgcattgca 41
>27359_mdo-mir-33:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgca 51
|||||||||||||||||||||
Sbjct: 2 gtgcattgtagttgcattgca 22
>31460_oan-mir-33b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgca 51
|||||||||||||||||||||
Sbjct: 14 gtgcattgtagttgcattgca 34
>31461_oan-mir-33b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgca 51
|||||||||||||||||||||
Sbjct: 14 gtgcattgtagttgcattgca 34
>35183_aae-mir-33:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgca 51
|||||||||||||||||||||
Sbjct: 9 gtgcattgtagttgcattgca 29
>35530_bmo-mir-33:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgca 51
|||||||||||||||||||||
Sbjct: 11 gtgcattgtagttgcattgca 31
>36014_cqu-mir-33:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 gtgcattgtagttgcattgca 51
|||||||||||||||||||||
Sbjct: 3 gtgcattgtagttgcattgca 23