miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37576_ngi-mir-34:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 61 acgaccgctatcggcactgcaattatgacg 90
||||||||||||||||||||||||||||||
Sbjct: 47 acgaccgctatcggcactgcaattatgacg 76
>37608_nlo-mir-34:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 61 acgaccgctatcggcactgcaattatgacg 90
||||||||||||||||||||||||||||||
Sbjct: 47 acgaccgctatcggcactgcaattatgacg 76
>37645_nvi-mir-34:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 1e-09
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 18 tgttggcagtgttgttagctggttgtgtggctacattgtatatacgaccgctatcggcac 77
|||||||||||| ||||||||||||||| ||| || | | ||||||||||||| |||
Sbjct: 18 tgttggcagtgtggttagctggttgtgtagctt-atagaaagcacgaccgctatcgacac 76
Query: 78 tgcaattatgacg 90
|||||||||||||
Sbjct: 77 tgcaattatgacg 89
>36267_dgr-mir-34:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgtggc 48
|||||||||| ||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtggc 41
>36777_dmo-mir-34:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgtggc 48
|||||||||| ||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtggc 41
>37353_dvi-mir-34:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgtggc 48
|||||||||| ||||||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgtggc 41
>35283_aga-mir-34:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tggcagtgttgttagctggttgtgtgg 47
||||||||| |||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgtgtgg 43
>35531_bmo-mir-34:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 19 gttggcagtgttgttagctggttgtgt 45
||||||||||| |||||||||||||||
Sbjct: 19 gttggcagtgtggttagctggttgtgt 45
>35005_dpu-mir-34:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 gttggcagtgttgttagctggttgtg 44
||||||||||| ||||||||||||||
Sbjct: 20 gttggcagtgtggttagctggttgtg 45
>36101_dan-mir-34:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>36179_der-mir-34:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>36373_dme-mir-34:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtgt 41
>36374_dme-mir-34:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtgt 41
>36850_dpe-mir-34:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>36926_dps-mir-34:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtgt 41
>37139_dse-mir-34:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>37215_dsi-mir-34:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>37430_dwi-mir-34:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>37507_dya-mir-34:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgttgttagctggttgtgt 45
|||||||||| |||||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtgt 38
>35184_aae-mir-34:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tggcagtgttgttagctggttgtgt 45
||||||||| |||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgtgt 40
>37723_tca-mir-34:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tggcagtgttgttagctggttgtgt 45
||||||||| |||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtgt 35
>37724_tca-mir-34:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tggcagtgttgttagctggttgtgt 45
||||||||| |||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtgt 35
>38739_cte-mir-34:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tggcagtgttgttagctggttgtg 44
||||||||| ||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgtg 45
