miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37581_ngi-mir-184:mirbase
          Length = 89

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                      
Query: 3  cgtgcccaaagccccttatcattctcctgtccggtgtagaattgttagacgactggacgg 62
          |||||| ||||||||||||||||||||||||  ||||  || |  |  ||||||||||||
Sbjct: 1  cgtgcctaaagccccttatcattctcctgtcgagtgttaaaattctctacgactggacgg 60

                                       
Query: 63 agaactgataagggcccgagggtcacaga 91
          ||||||||||||||||||||||| |||||
Sbjct: 61 agaactgataagggcccgagggttacaga 89




>37613_nlo-mir-184:mirbase
          Length = 89

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                      
Query: 3  cgtgcccaaagccccttatcattctcctgtccggtgtagaattgttagacgactggacgg 62
          |||||| ||||||||||||||||||||||||  ||||  || |  |  ||||||||||||
Sbjct: 1  cgtgcctaaagccccttatcattctcctgtcgagtgttaaaattctctacgactggacgg 60

                                       
Query: 63 agaactgataagggcccgagggtcacaga 91
          ||||||||||||||||||||||| |||||
Sbjct: 61 agaactgataagggcccgagggttacaga 89




>37653_nvi-mir-184:mirbase
          Length = 92

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                      
Query: 3  cgtgcccaaagccccttatcattctcctgtccggtgtagaattgttagacgactggacgg 62
          |||||| ||||||||||||||||||||||||  ||||  || |  |  ||||||||||||
Sbjct: 3  cgtgcctaaagccccttatcattctcctgtcgagtgttaaaattctctacgactggacgg 62

                                       
Query: 63 agaactgataagggcccgagggtcacaga 91
          ||||||||||||||||||||||| |||||
Sbjct: 63 agaactgataagggcccgagggttacaga 91




>35196_aae-mir-184:mirbase
          Length = 88

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 52 cgactggacggagaactgataagggcccg 80
          |||||||||||||||||||||||||||||
Sbjct: 51 cgactggacggagaactgataagggcccg 79




>36025_cqu-mir-184:mirbase
          Length = 85

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 52 cgactggacggagaactgataagggcccg 80
          |||||||||||||||||||||||||||||
Sbjct: 48 cgactggacggagaactgataagggcccg 76




>35293_aga-mir-184:mirbase
          Length = 82

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 54 actggacggagaactgataagggcccg 80
          |||||||||||||||||||||||||||
Sbjct: 49 actggacggagaactgataagggcccg 75




>24688_bfl-mir-184:mirbase
          Length = 101

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 55 ctggacggagaactgataagggcccg 80
          ||||||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggcccg 85




>37362_dvi-mir-184:mirbase
          Length = 98

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 48 tagacgactggacggagaactgataagggc 77
          ||||| ||||||||||||||||||||||||
Sbjct: 51 tagacaactggacggagaactgataagggc 80




>37441_dwi-mir-184:mirbase
          Length = 88

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 48 tagacgactggacggagaactgataagggc 77
          ||||| ||||||||||||||||||||||||
Sbjct: 47 tagacaactggacggagaactgataagggc 76




>38757_cte-mir-184a:mirbase
          Length = 101

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 54 actggacggagaactgataagggcc 78
          |||||||||||||||||||||||||
Sbjct: 59 actggacggagaactgataagggcc 83




>36110_dan-mir-184:mirbase
          Length = 88

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 48 agacaactggacggagaactgataagggc 76




>36188_der-mir-184:mirbase
          Length = 88

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 48 agacaactggacggagaactgataagggc 76




>36393_dme-mir-184:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 54 agacaactggacggagaactgataagggc 82




>36394_dme-mir-184:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 54 agacaactggacggagaactgataagggc 82




>36862_dpe-mir-184:mirbase
          Length = 88

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 48 agacaactggacggagaactgataagggc 76




>36937_dps-mir-184:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 54 agacaactggacggagaactgataagggc 82




>37148_dse-mir-184:mirbase
          Length = 88

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 48 agacaactggacggagaactgataagggc 76




>37224_dsi-mir-184:mirbase
          Length = 88

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 48 agacaactggacggagaactgataagggc 76




>37516_dya-mir-184:mirbase
          Length = 87

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 49 agacgactggacggagaactgataagggc 77
          |||| ||||||||||||||||||||||||
Sbjct: 47 agacaactggacggagaactgataagggc 75




>38873_lgi-mir-184:mirbase
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 54 actggacggagaactgataagggc 77
          ||||||||||||||||||||||||
Sbjct: 59 actggacggagaactgataagggc 82




>35065_api-mir-184a:mirbase
          Length = 65

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 54 actggacggagaactgataagggc 77
          ||||||||||||||||||||||||
Sbjct: 36 actggacggagaactgataagggc 59




>35541_bmo-mir-184:mirbase
          Length = 84

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 54 actggacggagaactgataagggc 77
          ||||||||||||||||||||||||
Sbjct: 50 actggacggagaactgataagggc 73




>36277_dgr-mir-184:mirbase
          Length = 88

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 54 actggacggagaactgataagggc 77
          ||||||||||||||||||||||||
Sbjct: 53 actggacggagaactgataagggc 76




>36786_dmo-mir-184:mirbase
          Length = 98

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 54 actggacggagaactgataagggc 77
          ||||||||||||||||||||||||
Sbjct: 57 actggacggagaactgataagggc 80




>37747_tca-mir-184:mirbase
          Length = 79

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 54 actggacggagaactgataagggc 77
          ||||||||||||||||||||||||
Sbjct: 47 actggacggagaactgataagggc 70




>37748_tca-mir-184:mirbase
          Length = 79

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 54 actggacggagaactgataagggc 77
          ||||||||||||||||||||||||
Sbjct: 47 actggacggagaactgataagggc 70




>34829_spu-mir-184:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 55 ctggacggagaactgataagggc 77
          |||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82




>34885_sko-mir-184:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 55 ctggacggagaactgataagggc 77
          |||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82




>34975_isc-mir-184:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 55 ctggacggagaactgataagggc 77
          |||||||||||||||||||||||
Sbjct: 60 ctggacggagaactgataagggc 82




>24844_cin-mir-184:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 56 tggacggagaactgataagggc 77
          ||||||||||||||||||||||
Sbjct: 66 tggacggagaactgataagggc 87




>34335_dre-mir-184:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 56 tggacggagaactgataagggc 77
          ||||||||||||||||||||||
Sbjct: 55 tggacggagaactgataagggc 76




>34336_dre-mir-184-2:mirbase
          Length = 79

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 56 tggacggagaactgataagggc 77
          ||||||||||||||||||||||
Sbjct: 49 tggacggagaactgataagggc 70




>25979_gga-mir-184:mirbase
          Length = 74

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>26487_tgu-mir-184:mirbase
          Length = 112

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 56  tggacggagaactgataaggg 76
           |||||||||||||||||||||
Sbjct: 81  tggacggagaactgataaggg 101




>26739_cfa-mir-184:mirbase
          Length = 68

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 42 tggacggagaactgataaggg 62




>27065_eca-mir-184:mirbase
          Length = 70

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 46 tggacggagaactgataaggg 66




>27408_mdo-mir-184:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>27775_mml-mir-184:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>28225_mne-mir-184:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>28491_hsa-mir-184:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>30259_ptr-mir-184:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>30873_ppy-mir-184:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>31900_mmu-mir-184:mirbase
          Length = 69

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 45 tggacggagaactgataaggg 65




>32770_rno-mir-184:mirbase
          Length = 77

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 47 tggacggagaactgataaggg 67




>33252_bta-mir-184:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72




>34014_ssc-mir-184:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 52 tggacggagaactgataaggg 72




>34616_fru-mir-184:mirbase
          Length = 73

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>34763_tni-mir-184:mirbase
          Length = 73

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 56 tggacggagaactgataaggg 76
          |||||||||||||||||||||
Sbjct: 53 tggacggagaactgataaggg 73




>25809_xtr-mir-184:mirbase
          Length = 83

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 56 tggacggagaactgataagg 75
          ||||||||||||||||||||
Sbjct: 53 tggacggagaactgataagg 72




>35066_api-mir-184b:mirbase
          Length = 60

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 54 actggacggagaactgataa 73
          ||||||||||||||||||||
Sbjct: 37 actggacggagaactgataa 56