miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35303_aga-mir-278:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 aggtcggtgggactttcgtccgtttg 79
||||||||||||||||||||||||||
Sbjct: 51 aggtcggtgggactttcgtccgtttg 76
>35208_aae-mir-278:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 49 ggtcggtgggactttcgtccgtttg 73
>36036_cqu-mir-278:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 65 ggtcggtgggactttcgtccgtttg 89
>36120_dan-mir-278:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>36198_der-mir-278:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>36287_dgr-mir-278:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 56 ggtcggtgggactttcgtccgtttg 80
>36419_dme-mir-278:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>36420_dme-mir-278:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>36795_dmo-mir-278:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 57 ggtcggtgggactttcgtccgtttg 81
>36872_dpe-mir-278:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>36952_dps-mir-278:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>37158_dse-mir-278:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>37236_dsi-mir-278:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>37372_dvi-mir-278:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 56 ggtcggtgggactttcgtccgtttg 80
>37451_dwi-mir-278:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>37527_dya-mir-278:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgtttg 79
|||||||||||||||||||||||||
Sbjct: 55 ggtcggtgggactttcgtccgtttg 79
>35023_dpu-mir-278:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 aggtcggtgggactttcgtccgt 76
|||||||||||||||||||||||
Sbjct: 58 aggtcggtgggactttcgtccgt 80
>34981_isc-mir-278:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 54 aggtcggtgggactttcgtccgttt 78
|||||||||||| ||||||||||||
Sbjct: 65 aggtcggtgggattttcgtccgttt 89
>34894_sko-mir-278:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 57 tcggtgggactttcgtccgtttgcaaga 84
|||||||||||||||| |||||| ||||
Sbjct: 61 tcggtgggactttcgttcgtttggaaga 88
>35078_api-mir-278:mirbase
Length = 66
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 ggtcggtgggactttcgtccgttt 78
|||||||||||||||||| |||||
Sbjct: 43 ggtcggtgggactttcgttcgttt 66