miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37591_ngi-mir-305:mirbase
Length = 88
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 ggaggctgcatgttaattgtacttcatcaggtgctctggtgaactcgatacccggcacct 60
|||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||
Sbjct: 1 ggaggctgcatgttaattgtacttcatcaggtgctctggtgattttgatacccggtgcct 60
Query: 61 gttggagcgcaattcatatgactgtgcc 88
||||||||||||||||||||| ||||||
Sbjct: 61 gttggagcgcaattcatatgattgtgcc 88
>37622_nlo-mir-305:mirbase
Length = 88
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 ggaggctgcatgttaattgtacttcatcaggtgctctggtgaactcgatacccggcacct 60
|||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||
Sbjct: 1 ggaggctgcatgttaattgtacttcatcaggtgctctggtgattttgatacccggtgcct 60
Query: 61 gttggagcgcaattcatatgactgtgcc 88
||||||||||||||||||||| ||||||
Sbjct: 61 gttggagcgcaattcatatgattgtgcc 88
>37666_nvi-mir-305:mirbase
Length = 90
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 ggaggctgcatgttaattgtacttcatcaggtgctctggtgaactcgatacccggcacct 60
|||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||
Sbjct: 1 ggaggctgcatgttaattgtacttcatcaggtgctctggtgattttgatacccggtgcct 60
Query: 61 gttggagcgcaattcatatgactgtgcc 88
||||||||||||||||||||| ||||||
Sbjct: 61 gttggagcgcaattcatatgattgtgcc 88
>35218_aae-mir-305:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctgg-tgaactcgatacccggcacctgttggag 67
|||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 15 attgtacttcatcaggtgctctggttgttttcgatacccggcacatgttggag 67
>36041_cqu-mir-305:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctgg-tgaactcgatacccggcacctgttggag 67
|||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 15 attgtacttcatcaggtgctctggttgctttcgatacccggcacatgttggag 67
>34984_isc-mir-305:mirbase
Length = 90
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 12 gttaattgtacttcatcaggtgctctgg 39
||||||||||||||||||||||||||||
Sbjct: 10 gttaattgtacttcatcaggtgctctgg 37
>35561_bmo-mir-305:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtga 42
|||||||||||||||||||||||||||
Sbjct: 17 attgtacttcatcaggtgctctggtga 43
>35309_aga-mir-305:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 15 attgtacttcatcaggtgctctggtg 40
>36134_dan-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>36212_der-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>36302_dgr-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>36445_dme-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>36446_dme-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>36808_dmo-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>36884_dpe-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>36966_dps-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>37172_dse-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>37385_dvi-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>37464_dwi-mir-305:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>37541_dya-mir-305:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggtg 41
||||||||||||||||||||||||||
Sbjct: 8 attgtacttcatcaggtgctctggtg 33
>37788_tca-mir-305:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggt 40
|||||||||||||||||||||||||
Sbjct: 10 attgtacttcatcaggtgctctggt 34
>37789_tca-mir-305:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 attgtacttcatcaggtgctctggt 40
|||||||||||||||||||||||||
Sbjct: 10 attgtacttcatcaggtgctctggt 34