miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37799_tca-mir-316:mirbase
          Length = 89

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 15 gtgtctttttccgctttgctgccgctg 41
          |||||||||||||||||||||||||||
Sbjct: 16 gtgtctttttccgctttgctgccgctg 42

>37800_tca-mir-316:mirbase
          Length = 89

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 15 gtgtctttttccgctttgctgccgctg 41
          |||||||||||||||||||||||||||
Sbjct: 16 gtgtctttttccgctttgctgccgctg 42

>35086_api-mir-316:mirbase
          Length = 62

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 tgtctttttccgctttgctgccg 38
          |||||||||||||||||||||||
Sbjct: 1  tgtctttttccgctttgctgccg 23

>35566_bmo-mir-316:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tgtctttttccgctttgctgc 36
          |||||||||||||||||||||
Sbjct: 11 tgtctttttccgctttgctgc 31