miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37594_ngi-mir-927:mirbase
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 tatttgttttagaattcctacgctttaccg 44
||||||||||||||||||||||||||||||
Sbjct: 15 tatttgttttagaattcctacgctttaccg 44
>37624_nlo-mir-927:mirbase
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 tatttgttttagaattcctacgctttaccg 44
||||||||||||||||||||||||||||||
Sbjct: 15 tatttgttttagaattcctacgctttaccg 44
>37671_nvi-mir-927:mirbase
Length = 102
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 tatttgttttagaattcctacgctttaccg 44
||||||||||||||||||||||||||||||
Sbjct: 15 tatttgttttagaattcctacgctttaccg 44
>35318_aga-mir-927:mirbase
Length = 93
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 17 tttgttttagaattcctacgctttacc 43
|||||||||||||||||||||||||||
Sbjct: 11 tttgttttagaattcctacgctttacc 37
>36979_dps-mir-927:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tgttttagaattcctacgctttaccg 44
||||||||||||||||||||||||||
Sbjct: 12 tgttttagaattcctacgctttaccg 37
>36477_dme-mir-927:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 gttttagaattcctacgctttaccg 44
|||||||||||||||||||||||||
Sbjct: 14 gttttagaattcctacgctttaccg 38
>36478_dme-mir-927:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 gttttagaattcctacgctttaccg 44
|||||||||||||||||||||||||
Sbjct: 14 gttttagaattcctacgctttaccg 38
>37263_dsi-mir-927:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 gttttagaattcctacgctttaccg 44
|||||||||||||||||||||||||
Sbjct: 15 gttttagaattcctacgctttaccg 39
>35230_aae-mir-927:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 17 tttgttttagaattcctacgctttaccg 44
|||| |||||||||||||||||||||||
Sbjct: 3 tttgctttagaattcctacgctttaccg 30
>35571_bmo-mir-927:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 17 tttgttttagaattcctacgctttaccg 44
|||| |||||||||||||||||||||||
Sbjct: 10 tttgctttagaattcctacgctttaccg 37
>35585_bmo-mir-1926:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 17 tttgttttagaattcctacgctttaccg 44
|||| |||||||||||||||||||||||
Sbjct: 80 tttgctttagaattcctacgctttaccg 53
>35088_api-mir-927:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tttagaattcctacgctttaccg 44
|||||||||||||||||||||||
Sbjct: 1 tttagaattcctacgctttaccg 23
>37807_tca-mir-927:mirbase
Length = 68
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tttagaattcctacgctttaccg 44
|||||||||||||||||||||||
Sbjct: 7 tttagaattcctacgctttaccg 29
>37808_tca-mir-927:mirbase
Length = 68
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tttagaattcctacgctttaccg 44
|||||||||||||||||||||||
Sbjct: 7 tttagaattcctacgctttaccg 29