miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>37596_ngi-mir-932:mirbase
          Length = 88

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 4  cgcgttgcctcttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  cgcgttgcctcttcaattccgtagtgcattgcag 34




>37626_nlo-mir-932:mirbase
          Length = 88

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 4  cgcgttgcctcttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  cgcgttgcctcttcaattccgtagtgcattgcag 34




>37674_nvi-mir-932:mirbase
          Length = 100

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 4  cgcgttgcctcttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||||||||||||
Sbjct: 4  cgcgttgcctcttcaattccgtagtgcattgcag 37




>37811_tca-mir-932:mirbase
          Length = 84

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||||
Sbjct: 11 tcttcaattccgtagtgcattgcag 35




>37812_tca-mir-932:mirbase
          Length = 84

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tcttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||||
Sbjct: 11 tcttcaattccgtagtgcattgcag 35




>35233_aae-mir-932:mirbase
          Length = 95

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 cttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||
Sbjct: 16 cttcaattccgtagtgcattgcag 39




>35573_bmo-mir-932:mirbase
          Length = 89

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 cttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||
Sbjct: 10 cttcaattccgtagtgcattgcag 33




>36049_cqu-mir-932:mirbase
          Length = 65

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 14 cttcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||||
Sbjct: 2  cttcaattccgtagtgcattgcag 25




>36481_dme-mir-932:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 ttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcag 37




>36482_dme-mir-932:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 ttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||
Sbjct: 15 ttcaattccgtagtgcattgcag 37




>37265_dsi-mir-932:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 ttcaattccgtagtgcattgcag 37
          |||||||||||||||||||||||
Sbjct: 20 ttcaattccgtagtgcattgcag 42




>36981_dps-mir-932:mirbase
          Length = 118

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tcaattccgtagtgcattgcag 37
          ||||||||||||||||||||||
Sbjct: 29 tcaattccgtagtgcattgcag 50