miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>34838_spu-mir-981:mirbase
          Length = 78

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 57 gttcgttgtcaacgaaacctgc 78
          ||||||||||||||||||||||
Sbjct: 49 gttcgttgtcaacgaaacctgc 70

>37819_tca-mir-981:mirbase
          Length = 96

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 55 tggttcgttgtcaacgaaacctgca 79
          |||||||||||| ||||||||||||
Sbjct: 58 tggttcgttgtcgacgaaacctgca 82

>35238_aae-mir-981:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 57 gttcgttgtcaacgaaacctgcac 80
          |||||||||| |||||||||||||
Sbjct: 57 gttcgttgtcgacgaaacctgcac 80

>35324_aga-mir-981:mirbase
          Length = 95

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 58 ttcgttgtcaacgaaacctgcacg 81
          ||||||||| ||||||||||||||
Sbjct: 63 ttcgttgtcgacgaaacctgcacg 86

>36054_cqu-mir-981:mirbase
          Length = 99

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 57 gttcgttgtcaacgaaacctgcac 80
          |||||||||| |||||||||||||
Sbjct: 61 gttcgttgtcgacgaaacctgcac 84