miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37676_nvi-mir-2796:mirbase
Length = 85
Score = 101 bits (51), Expect = 1e-22
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 29 aaggttaggggtttctatcggcctccagcagcaacgatggttgtaggccggcggaaacta 88
|||||||||||||||||||||||||||||||| | || | |||||||||||||||||||
Sbjct: 9 aaggttaggggtttctatcggcctccagcagctaagacagctgtaggccggcggaaacta 68
Query: 89 cttgctcttgt 99
|||||||||||
Sbjct: 69 cttgctcttgt 79
>37836_tca-mir-2796:mirbase
Length = 158
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 68 gttgtaggccggcggaaactacttgct 94
|||||||||||||||||||||||||||
Sbjct: 84 gttgtaggccggcggaaactacttgct 110
>37837_tca-mir-2796:mirbase
Length = 158
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 68 gttgtaggccggcggaaactacttgct 94
|||||||||||||||||||||||||||
Sbjct: 84 gttgtaggccggcggaaactacttgct 110
>35680_bmo-mir-2796:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 tgtaggccggcggaaactacttgc 93
||||||||||||||||||||||||
Sbjct: 46 tgtaggccggcggaaactacttgc 69
>35681_bmo-mir-2796:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 70 tgtaggccggcggaaactacttgc 93
||||||||||||||||||||||||
Sbjct: 46 tgtaggccggcggaaactacttgc 69
>35101_api-mir-2796:mirbase
Length = 63
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 ttgtaggccggcggaaactact 90
||||||||||||||||||||||
Sbjct: 40 ttgtaggccggcggaaactact 61
