miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>37781_tca-mir-281:mirbase
          Length = 67

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 58/64 (90%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                      
Query: 7  aatgaagagagctatccgtcgacagtattgctgataaacactgtcatggagttgctctct 66
          ||||||||||||||||||||||||||||   | ||  |||||||||||||||||||||||
Sbjct: 6  aatgaagagagctatccgtcgacagtat--ataatttacactgtcatggagttgctctct 63

              
Query: 67 ttat 70
          ||||
Sbjct: 64 ttat 67




>37782_tca-mir-281:mirbase
          Length = 67

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 58/64 (90%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                      
Query: 7  aatgaagagagctatccgtcgacagtattgctgataaacactgtcatggagttgctctct 66
          ||||||||||||||||||||||||||||   | ||  |||||||||||||||||||||||
Sbjct: 6  aatgaagagagctatccgtcgacagtat--ataatttacactgtcatggagttgctctct 63

              
Query: 67 ttat 70
          ||||
Sbjct: 64 ttat 67




>35081_api-mir-281:mirbase
          Length = 62

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 55/62 (88%), Gaps = 2/62 (3%)
 Strand = Plus / Plus

                                                                      
Query: 11 aagagagctatccgtcgacagtattgctgataa--acactgtcatggagttgctctcttt 68
          ||||||||||||||||||||||||   |  |||  |||||||||||||||||||||||||
Sbjct: 1  aagagagctatccgtcgacagtataatttttaactacactgtcatggagttgctctcttt 60

            
Query: 69 at 70
          ||
Sbjct: 61 at 62




>35386_ame-mir-281:mirbase
          Length = 103

 Score = 58.0 bits (29), Expect = 9e-10
 Identities = 53/60 (88%), Gaps = 2/60 (3%)
 Strand = Plus / Plus

                                                                      
Query: 11 aagagagctatccgtcgacagtattgctg--ataaacactgtcatggagttgctctcttt 68
          ||||||||||||| |||||||||| | |   ||| |||||||||||||||||||||||||
Sbjct: 22 aagagagctatccatcgacagtatggttataatagacactgtcatggagttgctctcttt 81




>37566_lmi-mir-281:mirbase
          Length = 58

 Score = 54.0 bits (27), Expect = 1e-08
 Identities = 53/59 (89%), Gaps = 2/59 (3%)
 Strand = Plus / Plus

                                                                     
Query: 11 aagagagctatccgtcgacagtattgctgataaacactgtcatggagttgctctcttta 69
          |||||||||||||||||||||||  | |||  || ||||||||||||||||||||||||
Sbjct: 1  aagagagctatccgtcgacagtacag-tgagtaa-actgtcatggagttgctctcttta 57




>24703_bfl-mir-281:mirbase
          Length = 85

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 43 aacactgtcatggagttgctctcttt 68
          ||||||||||||||||||||||||||
Sbjct: 54 aacactgtcatggagttgctctcttt 79




>35305_aga-mir-281:mirbase
          Length = 102

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 55/62 (88%), Gaps = 2/62 (3%)
 Strand = Plus / Plus

                                                                      
Query: 11 aagagagctatccgtcgacagtattgctgataa-acactgtcatggagttgctctcttta 69
          |||||||||||||||||||||||  | | ||||  |||||||||||| ||||||||||||
Sbjct: 20 aagagagctatccgtcgacagtagggat-ataattcactgtcatggaattgctctcttta 78

            
Query: 70 tg 71
          ||
Sbjct: 79 tg 80




>36124_dan-mir-281-2:mirbase
          Length = 94

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 60 actgtcatggaattgctctcttt 82




>36202_der-mir-281-2:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>36291_dgr-mir-281-2:mirbase
          Length = 93

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 59 actgtcatggaattgctctcttt 81




>36426_dme-mir-281-2:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>36427_dme-mir-281-2:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>36799_dmo-mir-281-2:mirbase
          Length = 93

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 59 actgtcatggaattgctctcttt 81




>37162_dse-mir-281-2:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>37376_dvi-mir-281-2:mirbase
          Length = 91

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79




>37455_dwi-mir-281-2:mirbase
          Length = 97

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 63 actgtcatggaattgctctcttt 85




>37531_dya-mir-281-2:mirbase
          Length = 92

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 7  aatgaagagagctatccgtcgacagt 32
          ||||||||||||||||||||||||||
Sbjct: 11 aatgaagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80




>38884_lgi-mir-281:mirbase
          Length = 101

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 41 taaacactgtcatggagttgctctcttta 69
          |||| ||||||||||||||||||||||||
Sbjct: 54 taaatactgtcatggagttgctctcttta 82




>35210_aae-mir-281:mirbase
          Length = 97

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                      
Query: 11 aagagagctatccgtcgacagtattgctgataaacactgtcatggagttgctctctttat 70
          |||||||||||||||||||||||  | |   |  |||||||||||| |||||||||||||
Sbjct: 21 aagagagctatccgtcgacagtagggatatgattcactgtcatggaattgctctctttat 80

           
Query: 71 g 71
          |
Sbjct: 81 g 81




>36038_cqu-mir-281:mirbase
          Length = 107

 Score = 50.1 bits (25), Expect = 2e-07
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                      
Query: 11 aagagagctatccgtcgacagtattgctgataaacactgtcatggagttgctctctttat 70
          |||||||||||||||||||||||  | |   |  |||||||||||| |||||||||||||
Sbjct: 26 aagagagctatccgtcgacagtagggatatgattcactgtcatggaattgctctctttat 85

           
Query: 71 g 71
          |
Sbjct: 86 g 86




>35026_dpu-mir-281:mirbase
          Length = 88

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 45 cactgtcatggagttgctctctttatg 71
          ||||||||||||| |||||||||||||
Sbjct: 58 cactgtcatggagctgctctctttatg 84




>37589_ngi-mir-281:mirbase
          Length = 73

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 53/61 (86%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 11 aagagagctatccgtcgacagtattgctgataaa---cactgtcatggagttgctctctt 67
          ||||||||||||| |||||||||| | ||||| |   |||||||||||| ||||||||||
Sbjct: 8  aagagagctatccatcgacagtatgg-tgatagatgacactgtcatggacttgctctctt 66

           
Query: 68 t 68
          |
Sbjct: 67 t 67




>37620_nlo-mir-281:mirbase
          Length = 73

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 53/61 (86%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 11 aagagagctatccgtcgacagtattgctgataaa---cactgtcatggagttgctctctt 67
          ||||||||||||| |||||||||| | ||||| |   |||||||||||| ||||||||||
Sbjct: 8  aagagagctatccatcgacagtatgg-tgatagatgacactgtcatggacttgctctctt 66

           
Query: 68 t 68
          |
Sbjct: 67 t 67




>37663_nvi-mir-281:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 53/61 (86%), Gaps = 4/61 (6%)
 Strand = Plus / Plus

                                                                      
Query: 11 aagagagctatccgtcgacagtattgctgataaa---cactgtcatggagttgctctctt 67
          ||||||||||||| |||||||||| | ||||| |   |||||||||||| ||||||||||
Sbjct: 22 aagagagctatccatcgacagtatgg-tgatagatgacactgtcatggacttgctctctt 80

           
Query: 68 t 68
          |
Sbjct: 81 t 81




>38774_cte-mir-281:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 48 tgtcatggagttgctctcttta 69
          ||||||||||||||||||||||
Sbjct: 62 tgtcatggagttgctctcttta 83




>24852_cin-mir-281:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 46 actgtcatggagttgctctctt 67
          ||||||||||||||||||||||
Sbjct: 64 actgtcatggagttgctctctt 85




>36123_dan-mir-281-1:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 43 aacactgtcatggagttgctctcttt 68
          |||||||||||||| |||||||||||
Sbjct: 49 aacactgtcatggaattgctctcttt 74




>36876_dpe-mir-281-2:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 aagagagctatccgtcgacagt 32
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79




>36956_dps-mir-281-2:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 aagagagctatccgtcgacagt 32
          ||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36



 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79




>34895_sko-mir-281:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 47 ctgtcatggagttgctctctt 67
          |||||||||||||||||||||
Sbjct: 60 ctgtcatggagttgctctctt 80




>25337_csa-mir-281:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 47 ctgtcatggagttgctctct 66
          ||||||||||||||||||||
Sbjct: 65 ctgtcatggagttgctctct 84




>25536_pma-mir-281a:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 48 tgtcatggagttgctctctt 67
          ||||||||||||||||||||
Sbjct: 55 tgtcatggagttgctctctt 74




>36201_der-mir-281-1:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 45 cactgtcatggagttgctctcttt 68
          |||||||||||| |||||||||||
Sbjct: 55 cactgtcatggaattgctctcttt 78




>36424_dme-mir-281-1:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 45 cactgtcatggagttgctctcttt 68
          |||||||||||| |||||||||||
Sbjct: 55 cactgtcatggaattgctctcttt 78




>36425_dme-mir-281-1:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 45 cactgtcatggagttgctctcttt 68
          |||||||||||| |||||||||||
Sbjct: 55 cactgtcatggaattgctctcttt 78




>37161_dse-mir-281-1:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 45 cactgtcatggagttgctctcttt 68
          |||||||||||| |||||||||||
Sbjct: 55 cactgtcatggaattgctctcttt 78




>37238_dsi-mir-281:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 45 cactgtcatggagttgctctcttt 68
          |||||||||||| |||||||||||
Sbjct: 55 cactgtcatggaattgctctcttt 78




>37530_dya-mir-281-1:mirbase
          Length = 90

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 45 cactgtcatggagttgctctcttt 68
          |||||||||||| |||||||||||
Sbjct: 55 cactgtcatggaattgctctcttt 78




>38122_bma-mir-281:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 46 actgtcatggagttgctctcttta 69
          ||||||||||| ||||||||||||
Sbjct: 51 actgtcatggaattgctctcttta 74




>36290_dgr-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>36798_dmo-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>36875_dpe-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>36955_dps-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>37375_dvi-mir-281-1:mirbase
          Length = 88

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76




>37454_dwi-mir-281-1:mirbase
          Length = 90

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 46 actgtcatggagttgctctcttt 68
          ||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78