miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>35578_bmo-mir-993a:mirbase
          Length = 88

 Score = 85.7 bits (43), Expect = 7e-18
 Identities = 76/86 (88%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                      
Query: 1  ggcacattcgtgatctaccctgtagatccgggctttcgtaaa--aaacaaatcgaaagct 58
          |||||||||||||||||||||||||||||||||||| ||| |  ||  | |||  |||||
Sbjct: 1  ggcacattcgtgatctaccctgtagatccgggcttttgtagattaattacatcagaagct 60

                                    
Query: 59 cgtctctacaggtatatcacggctgg 84
          ||||||||||||||| ||||||||||
Sbjct: 61 cgtctctacaggtatctcacggctgg 86




>35409_ame-mir-993:mirbase
          Length = 89

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                              
Query: 1  ggcacattcgtgatctaccctgtagatccgggcttt 36
          ||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggcacattcgtgatctaccctgtagatccgggcttt 36




>37675_nvi-mir-993:mirbase
          Length = 119

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                              
Query: 1  ggcacattcgtgatctaccctgtagatccgggcttt 36
          ||||||||||||||||||||||||||||||||||||
Sbjct: 30 ggcacattcgtgatctaccctgtagatccgggcttt 65




>37822_tca-mir-993:mirbase
          Length = 88

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 1  ggcacattcgtgatctaccctgtagatccgggcttt 36
          ||||||| ||||||||||||||||||||||||||||
Sbjct: 1  ggcacatccgtgatctaccctgtagatccgggcttt 36




>37823_tca-mir-993:mirbase
          Length = 88

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                              
Query: 1  ggcacattcgtgatctaccctgtagatccgggcttt 36
          ||||||| ||||||||||||||||||||||||||||
Sbjct: 1  ggcacatccgtgatctaccctgtagatccgggcttt 36




>37597_ngi-mir-993:mirbase
          Length = 85

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 8  tcgtgatctaccctgtagatccgggcttt 36
          |||||||||||||||||||||||||||||
Sbjct: 6  tcgtgatctaccctgtagatccgggcttt 34




>35094_api-mir-993:mirbase
          Length = 88

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                      
Query: 9  cgtgatctaccctgtagatccgggcttt 36
          ||||||||||||||||||||||||||||
Sbjct: 5  cgtgatctaccctgtagatccgggcttt 32



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 54 aagctcgtctctacaggtat 73
          ||||||||||||||||||||
Sbjct: 56 aagctcgtctctacaggtat 75




>37627_nlo-mir-993:mirbase
          Length = 89

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 5  cattcgtgatctaccctgtagatccgggcttt 36
          |||| |||||||||||||||||||||||||||
Sbjct: 5  cattggtgatctaccctgtagatccgggcttt 36




>34990_isc-mir-993:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 7  ttcgtgatctaccctgtagatccgggcttt 36
          ||||| |||||||||||||| |||||||||
Sbjct: 10 ttcgtaatctaccctgtagaaccgggcttt 39




>36563_dme-mir-993:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 54  aagctcgtctctacaggtatatcac 78
           |||||||||||||||||||| ||||
Sbjct: 86  aagctcgtctctacaggtatctcac 110



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 9  cgtgatctaccctgtagatccgggcttt 36
          ||||| ||||||||||| ||||||||||
Sbjct: 9  cgtgacctaccctgtagttccgggcttt 36




>36564_dme-mir-993:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 54  aagctcgtctctacaggtatatcac 78
           |||||||||||||||||||| ||||
Sbjct: 86  aagctcgtctctacaggtatctcac 110



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 9  cgtgatctaccctgtagatccgggcttt 36
          ||||| ||||||||||| ||||||||||
Sbjct: 9  cgtgacctaccctgtagttccgggcttt 36




>36997_dps-mir-993:mirbase
          Length = 114

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 54  aagctcgtctctacaggtatatcac 78
           |||||||||||||||||||| ||||
Sbjct: 82  aagctcgtctctacaggtatctcac 106



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 9  cgtgatctaccctgtagatccgggcttt 36
          ||||| ||||||||||| ||||||||||
Sbjct: 5  cgtgacctaccctgtagttccgggcttt 32




>37298_dsi-mir-993:mirbase
          Length = 114

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 54  aagctcgtctctacaggtatatcac 78
           |||||||||||||||||||| ||||
Sbjct: 82  aagctcgtctctacaggtatctcac 106



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 9  cgtgatctaccctgtagatccgggcttt 36
          ||||| ||||||||||| ||||||||||
Sbjct: 5  cgtgacctaccctgtagttccgggcttt 32




>35241_aae-mir-993:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 9  cgtgatctaccctgtagatccgggcttt 36
          ||||| ||||||||||| ||||||||||
Sbjct: 11 cgtgacctaccctgtagttccgggcttt 38




>35327_aga-mir-993:mirbase
          Length = 120

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 9  cgtgatctaccctgtagatccgggcttt 36
          ||||| ||||||||||| ||||||||||
Sbjct: 11 cgtgacctaccctgtagttccgggcttt 38




>36057_cqu-mir-993:mirbase
          Length = 99

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 9  cgtgatctaccctgtagatccgggcttt 36
          ||||| ||||||||||| ||||||||||
Sbjct: 11 cgtgacctaccctgtagttccgggcttt 38