miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>35185_aae-mir-71:mirbase
          Length = 77

 Score = 81.8 bits (41), Expect = 7e-17
 Identities = 73/82 (89%), Gaps = 5/82 (6%)
 Strand = Plus / Plus

                                                                      
Query: 1  cggcaagaaagacatgggtagtgagatagttttaccctgcattcgaaaaccgggatctca 60
          |||||||||||||||||||||||||||||||| |||||  |||     || |||||||||
Sbjct: 1  cggcaagaaagacatgggtagtgagatagtttcaccct--att---gcactgggatctca 55

                                
Query: 61 ctaccttgtctttcatgctgat 82
          ||||||||||||||||||||||
Sbjct: 56 ctaccttgtctttcatgctgat 77




>35532_bmo-mir-71:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 56 tctcactaccttgtctttcatgc 78
          |||||||||||||||||||||||
Sbjct: 61 tctcactaccttgtctttcatgc 83



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 22 gaaagacatgggtagtgagat 42




>37646_nvi-mir-71:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 56 tctcactaccttgtctttcatgc 78
          |||||||||||||||||||||||
Sbjct: 66 tctcactaccttgtctttcatgc 88



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 27 gaaagacatgggtagtgagat 47




>37726_tca-mir-71:mirbase
          Length = 79

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 56 tctcactaccttgtctttcatg 77
          ||||||||||||||||||||||
Sbjct: 51 tctcactaccttgtctttcatg 72



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 11 gaaagacatgggtagtgagat 31




>37725_tca-mir-71:mirbase
          Length = 79

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 56 tctcactaccttgtctttcatg 77
          ||||||||||||||||||||||
Sbjct: 51 tctcactaccttgtctttcatg 72



 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 11 gaaagacatgggtagtgagat 31




>39089_sme-mir-71c:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 12 gaaagacatgggtagtgagat 32




>38742_cte-mir-71:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 23 gaaagacatgggtagtgagat 43




>24665_bfl-mir-71:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 23 gaaagacatgggtagtgagat 43




>34816_spu-mir-71:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 23 gaaagacatgggtagtgagat 43




>34966_isc-mir-71:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 23 gaaagacatgggtagtgagat 43



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 55 atctcactaccttgtcttt 73
          |||||||||||||||||||
Sbjct: 62 atctcactaccttgtcttt 80




>35006_dpu-mir-71:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 23 gaaagacatgggtagtgagat 43




>35055_api-mir-71:mirbase
          Length = 62

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 2  gaaagacatgggtagtgagat 22




>35359_ame-mir-71:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gaaagacatgggtagtgagat 27
          |||||||||||||||||||||
Sbjct: 26 gaaagacatgggtagtgagat 46




>38533_crm-mir-71:mirbase
          Length = 120

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 7  gaaagacatgggtagtgaga 26
          ||||||||||||||||||||
Sbjct: 31 gaaagacatgggtagtgaga 50




>38105_bma-mir-71:mirbase
          Length = 91

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 7  gaaagacatgggtagtgaga 26
          ||||||||||||||||||||
Sbjct: 22 gaaagacatgggtagtgaga 41




>38180_cbr-mir-71:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 7  gaaagacatgggtagtgaga 26
          ||||||||||||||||||||
Sbjct: 12 gaaagacatgggtagtgaga 31




>38307_cel-mir-71:mirbase
          Length = 94

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 7  gaaagacatgggtagtgaga 26
          ||||||||||||||||||||
Sbjct: 17 gaaagacatgggtagtgaga 36