miRNEST 2.0, an integrative microRNA resource :: BLAST
>35197_aae-mir-190:mirbase
Length = 101
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 gggtgattccggtgagatatgtttgatattcttggttgttaaattttatattatcaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtgattccggtgagatatgtttgatattcttggttgttaaattttatattatcaccca 60
Query: 61 ggaatcaaacatattattactgtggtcatc 90
||||||||||||||||||||||||||||||
Sbjct: 61 ggaatcaaacatattattactgtggtcatc 90
>36026_cqu-mir-190-1:mirbase
Length = 90
Score = 170 bits (86), Expect = 1e-43
Identities = 89/90 (98%)
Strand = Plus / Plus
Query: 1 gggtgattccggtgagatatgtttgatattcttggttgttaaattttatattatcaccca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtgattccagtgagatatgtttgatattcttggttgttaaattttatattatcaccca 60
Query: 61 ggaatcaaacatattattactgtggtcatc 90
||||||||||||||||||||||||||||||
Sbjct: 61 ggaatcaaacatattattactgtggtcatc 90
>35294_aga-mir-190:mirbase
Length = 101
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 10 cggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaatcaaa 69
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 19 cggtgagatatgtttgatattcttggttgttaagatttcaattatcacccaggaatcaaa 78
Query: 70 catattattac 80
|||||||||||
Sbjct: 79 catattattac 89
>36938_dps-mir-190:mirbase
Length = 94
Score = 95.6 bits (48), Expect = 5e-21
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 5 gattccggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaa 64
|||||| |||||||||||||||||||||||||||||| ||| | | | |||||||||||
Sbjct: 7 gattccagtgagatatgtttgatattcttggttgttacattcaagagt-tcacccaggaa 65
Query: 65 tcaaacatattattactgtg 84
||||||||||||||||||||
Sbjct: 66 tcaaacatattattactgtg 85
>36395_dme-mir-190:mirbase
Length = 100
Score = 83.8 bits (42), Expect = 2e-17
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 7 ttccggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaatc 66
|||| ||||||||||||||||||||||||||||| ||| | | | |||||||||||||
Sbjct: 16 ttccagtgagatatgtttgatattcttggttgtttcattcaaaagt-tcacccaggaatc 74
Query: 67 aaacatattattactgtg 84
||||||||||||||||||
Sbjct: 75 aaacatattattactgtg 92
>36396_dme-mir-190:mirbase
Length = 100
Score = 83.8 bits (42), Expect = 2e-17
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 7 ttccggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaatc 66
|||| ||||||||||||||||||||||||||||| ||| | | | |||||||||||||
Sbjct: 16 ttccagtgagatatgtttgatattcttggttgtttcattcaaaagt-tcacccaggaatc 74
Query: 67 aaacatattattactgtg 84
||||||||||||||||||
Sbjct: 75 aaacatattattactgtg 92
>37225_dsi-mir-190:mirbase
Length = 89
Score = 75.8 bits (38), Expect = 5e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 7 ttccggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaatc 66
|||| |||||||||||||||||||||||||||| ||| | | | |||||||||||||
Sbjct: 6 ttccagtgagatatgtttgatattcttggttgtatcattcaaaagt-tcacccaggaatc 64
Query: 67 aaacatattattactgtg 84
||||||||||||||||||
Sbjct: 65 aaacatattattactgtg 82
>35372_ame-mir-190:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand = Plus / Plus
Query: 15 agatatgtttgatattcttggttgttaaattttatattatcacccaggaatcaaacatat 74
|||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||
Sbjct: 25 agatatgtttgatattcttggttgtt---ttttaaagaatcgaccaggaatcaaacatat 81
Query: 75 tattactgtggtca 88
||||| |||||||
Sbjct: 82 tattatggtggtca 95
>35067_api-mir-190:mirbase
Length = 68
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 12 gtgagatatgtttgatattcttggttgttaaattt 46
|||||||||||||||||||||||||||||| ||||
Sbjct: 4 gtgagatatgtttgatattcttggttgttatattt 38
>37749_tca-mir-190:mirbase
Length = 86
Score = 56.0 bits (28), Expect = 4e-09
Identities = 57/65 (87%), Gaps = 5/65 (7%)
Strand = Plus / Plus
Query: 15 agatatgtttgatattcttggttgttaaattttatattatcacccaggaatcaaacatat 74
||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||
Sbjct: 14 agatatgtttgatattcttggttgt---atttttaat--tcacccaggagtcaaacatat 68
Query: 75 tatta 79
|||||
Sbjct: 69 tatta 73
>37750_tca-mir-190:mirbase
Length = 86
Score = 56.0 bits (28), Expect = 4e-09
Identities = 57/65 (87%), Gaps = 5/65 (7%)
Strand = Plus / Plus
Query: 15 agatatgtttgatattcttggttgttaaattttatattatcacccaggaatcaaacatat 74
||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||
Sbjct: 14 agatatgtttgatattcttggttgt---atttttaat--tcacccaggagtcaaacatat 68
Query: 75 tatta 79
|||||
Sbjct: 69 tatta 73
>35542_bmo-mir-190:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 14 gagatatgtttgatattcttggttgtt 40
|||||||||||||||||||||||||||
Sbjct: 16 gagatatgtttgatattcttggttgtt 42
>37654_nvi-mir-190:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 agatatgtttgatattcttggttgt 39
|||||||||||||||||||||||||
Sbjct: 24 agatatgtttgatattcttggttgt 48
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 58 ccaggaatcaaacatattattac 80
|||||||||||||||||||||||
Sbjct: 62 ccaggaatcaaacatattattac 84
>38874_lgi-mir-190:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 15 agatatgtttgatattcttggttgttaa 42
||||||||||||||| |||||| |||||
Sbjct: 22 agatatgtttgatatacttggtggttaa 49