miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>35197_aae-mir-190:mirbase
          Length = 101

 Score =  178 bits (90), Expect = 4e-46
 Identities = 90/90 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggtgattccggtgagatatgtttgatattcttggttgttaaattttatattatcaccca 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gggtgattccggtgagatatgtttgatattcttggttgttaaattttatattatcaccca 60

                                        
Query: 61 ggaatcaaacatattattactgtggtcatc 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 ggaatcaaacatattattactgtggtcatc 90




>36026_cqu-mir-190-1:mirbase
          Length = 90

 Score =  170 bits (86), Expect = 1e-43
 Identities = 89/90 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  gggtgattccggtgagatatgtttgatattcttggttgttaaattttatattatcaccca 60
          |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gggtgattccagtgagatatgtttgatattcttggttgttaaattttatattatcaccca 60

                                        
Query: 61 ggaatcaaacatattattactgtggtcatc 90
          ||||||||||||||||||||||||||||||
Sbjct: 61 ggaatcaaacatattattactgtggtcatc 90




>35294_aga-mir-190:mirbase
          Length = 101

 Score =  109 bits (55), Expect = 3e-25
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                      
Query: 10 cggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaatcaaa 69
          |||||||||||||||||||||||||||||||||  |||  ||||||||||||||||||||
Sbjct: 19 cggtgagatatgtttgatattcttggttgttaagatttcaattatcacccaggaatcaaa 78

                     
Query: 70 catattattac 80
          |||||||||||
Sbjct: 79 catattattac 89




>36938_dps-mir-190:mirbase
          Length = 94

 Score = 95.6 bits (48), Expect = 5e-21
 Identities = 73/80 (91%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                      
Query: 5  gattccggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaa 64
          |||||| |||||||||||||||||||||||||||||| |||  | | | |||||||||||
Sbjct: 7  gattccagtgagatatgtttgatattcttggttgttacattcaagagt-tcacccaggaa 65

                              
Query: 65 tcaaacatattattactgtg 84
          ||||||||||||||||||||
Sbjct: 66 tcaaacatattattactgtg 85




>36395_dme-mir-190:mirbase
          Length = 100

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  ttccggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaatc 66
          |||| |||||||||||||||||||||||||||||  |||  | | | |||||||||||||
Sbjct: 16 ttccagtgagatatgtttgatattcttggttgtttcattcaaaagt-tcacccaggaatc 74

                            
Query: 67 aaacatattattactgtg 84
          ||||||||||||||||||
Sbjct: 75 aaacatattattactgtg 92




>36396_dme-mir-190:mirbase
          Length = 100

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  ttccggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaatc 66
          |||| |||||||||||||||||||||||||||||  |||  | | | |||||||||||||
Sbjct: 16 ttccagtgagatatgtttgatattcttggttgtttcattcaaaagt-tcacccaggaatc 74

                            
Query: 67 aaacatattattactgtg 84
          ||||||||||||||||||
Sbjct: 75 aaacatattattactgtg 92




>37225_dsi-mir-190:mirbase
          Length = 89

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 69/78 (88%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 7  ttccggtgagatatgtttgatattcttggttgttaaattttatattatcacccaggaatc 66
          |||| ||||||||||||||||||||||||||||   |||  | | | |||||||||||||
Sbjct: 6  ttccagtgagatatgtttgatattcttggttgtatcattcaaaagt-tcacccaggaatc 64

                            
Query: 67 aaacatattattactgtg 84
          ||||||||||||||||||
Sbjct: 65 aaacatattattactgtg 82




>35372_ame-mir-190:mirbase
          Length = 100

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 64/74 (86%), Gaps = 3/74 (4%)
 Strand = Plus / Plus

                                                                      
Query: 15 agatatgtttgatattcttggttgttaaattttatattatcacccaggaatcaaacatat 74
          ||||||||||||||||||||||||||   ||||| |  |||  |||||||||||||||||
Sbjct: 25 agatatgtttgatattcttggttgtt---ttttaaagaatcgaccaggaatcaaacatat 81

                        
Query: 75 tattactgtggtca 88
          |||||  |||||||
Sbjct: 82 tattatggtggtca 95




>35067_api-mir-190:mirbase
          Length = 68

 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 12 gtgagatatgtttgatattcttggttgttaaattt 46
          |||||||||||||||||||||||||||||| ||||
Sbjct: 4  gtgagatatgtttgatattcttggttgttatattt 38




>37749_tca-mir-190:mirbase
          Length = 86

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 57/65 (87%), Gaps = 5/65 (7%)
 Strand = Plus / Plus

                                                                      
Query: 15 agatatgtttgatattcttggttgttaaattttatattatcacccaggaatcaaacatat 74
          |||||||||||||||||||||||||   |||||  ||  |||||||||| ||||||||||
Sbjct: 14 agatatgtttgatattcttggttgt---atttttaat--tcacccaggagtcaaacatat 68

               
Query: 75 tatta 79
          |||||
Sbjct: 69 tatta 73




>37750_tca-mir-190:mirbase
          Length = 86

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 57/65 (87%), Gaps = 5/65 (7%)
 Strand = Plus / Plus

                                                                      
Query: 15 agatatgtttgatattcttggttgttaaattttatattatcacccaggaatcaaacatat 74
          |||||||||||||||||||||||||   |||||  ||  |||||||||| ||||||||||
Sbjct: 14 agatatgtttgatattcttggttgt---atttttaat--tcacccaggagtcaaacatat 68

               
Query: 75 tatta 79
          |||||
Sbjct: 69 tatta 73




>35542_bmo-mir-190:mirbase
          Length = 90

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 14 gagatatgtttgatattcttggttgtt 40
          |||||||||||||||||||||||||||
Sbjct: 16 gagatatgtttgatattcttggttgtt 42




>37654_nvi-mir-190:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 15 agatatgtttgatattcttggttgt 39
          |||||||||||||||||||||||||
Sbjct: 24 agatatgtttgatattcttggttgt 48



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 58 ccaggaatcaaacatattattac 80
          |||||||||||||||||||||||
Sbjct: 62 ccaggaatcaaacatattattac 84




>38874_lgi-mir-190:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 15 agatatgtttgatattcttggttgttaa 42
          ||||||||||||||| |||||| |||||
Sbjct: 22 agatatgtttgatatacttggtggttaa 49