miRNEST 2.0, an integrative microRNA resource :: BLAST
>35227_aae-mir-317-1:mirbase
Length = 92
Score = 174 bits (88), Expect = 7e-45
Identities = 91/92 (98%)
Strand = Plus / Plus
Query: 1 gaggaatttcggctaccgggatacaccctgtgctcgctttgcattcgaaactagtgaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggaatttcggctaccgggatacaccctgtgctcgctttgcattcgaaactagtgaaca 60
Query: 61 cagctggtggtatctcagtggccctgatccga 92
||||||||||||||||||||||||| ||||||
Sbjct: 61 cagctggtggtatctcagtggccctaatccga 92
>35228_aae-mir-317-2:mirbase
Length = 88
Score = 167 bits (84), Expect = 2e-42
Identities = 87/88 (98%)
Strand = Plus / Plus
Query: 3 ggaatttcggctaccgggatacaccctgtgctcgctttgcattcgaaactagtgaacaca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaatttcggctaccgggatacaccctgtgctcgctttgcattcgaaactagtgaacaca 60
Query: 63 gctggtggtatctcagtggccctgatcc 90
||||||||||||||||||||||| ||||
Sbjct: 61 gctggtggtatctcagtggccctaatcc 88
>35315_aga-mir-317:mirbase
Length = 90
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 48 aaactagtgaacacagctggtggtatctcagtggcc 83
||||||||||||||| ||||||||||||||||||||
Sbjct: 49 aaactagtgaacacatctggtggtatctcagtggcc 84
>37396_dvi-mir-317:mirbase
Length = 86
Score = 58.0 bits (29), Expect = 1e-09
Identities = 60/68 (88%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttgcat--tcgaaactagtgaacacagctggtggtatct 75
|||||||||||||||||||||||| || | || | ||||||||||||||||||||||
Sbjct: 14 gggatacaccctgtgctcgctttgaattgtgcaagcaagtgaacacagctggtggtatc- 72
Query: 76 cagtggcc 83
||||||||
Sbjct: 73 cagtggcc 80
>37473_dwi-mir-317:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 61/70 (87%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttgcat----tcgaaactagtgaacacagctggtggtat 73
|||||||||||||||||||||||| || | |||| |||||||||||||||||||||
Sbjct: 13 gggatacaccctgtgctcgctttgaatattgtgcaaacaagtgaacacagctggtggtat 72
Query: 74 ctcagtggcc 83
| ||||||||
Sbjct: 73 c-cagtggcc 81
>35567_bmo-mir-317:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 agtgaacacagctggtggtatctcagt 79
|||||||||||||||||||||||||||
Sbjct: 53 agtgaacacagctggtggtatctcagt 79
>37801_tca-mir-317:mirbase
Length = 77
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 agtgaacacagctggtggtatctcagt 79
|||||||||||||||||||||||||||
Sbjct: 44 agtgaacacagctggtggtatctcagt 70
>37802_tca-mir-317:mirbase
Length = 77
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 agtgaacacagctggtggtatctcagt 79
|||||||||||||||||||||||||||
Sbjct: 44 agtgaacacagctggtggtatctcagt 70
>35032_dpu-mir-317:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagt 79
||||||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatctcagt 85
>35394_ame-mir-317:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagt 79
||||||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>36146_dan-mir-317:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 7e-08
Identities = 67/79 (84%), Gaps = 5/79 (6%)
Strand = Plus / Plus
Query: 9 tcggctaccgggatacaccctgtgctcgctttgcat----tcgaaactagtgaacacagc 64
|||||| | |||||||||||||||||||||||| || | || | ||||||||||||
Sbjct: 5 tcggctgctgggatacaccctgtgctcgctttgaatgaaatgcaagcaagtgaacacagc 64
Query: 65 tggtggtatctcagtggcc 83
|||||||||| ||||||||
Sbjct: 65 tggtggtatc-cagtggcc 82
>37592_ngi-mir-317:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagt 79
||||||||||||||||||||||||||
Sbjct: 51 gtgaacacagctggtggtatctcagt 76
>37669_nvi-mir-317:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagt 79
||||||||||||||||||||||||||
Sbjct: 54 gtgaacacagctggtggtatctcagt 79
>36228_der-mir-317:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 60/70 (85%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttgcat----tcgaaactagtgaacacagctggtggtat 73
|||||||||||||||||||||||| || | || | |||||||||||||||||||||
Sbjct: 15 gggatacaccctgtgctcgctttgaatgaaatgcaagcaagtgaacacagctggtggtat 74
Query: 74 ctcagtggcc 83
| ||||||||
Sbjct: 75 c-cagtggcc 83
>36471_dme-mir-317:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 60/70 (85%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttgcat----tcgaaactagtgaacacagctggtggtat 73
|||||||||||||||||||||||| || | || | |||||||||||||||||||||
Sbjct: 15 gggatacaccctgtgctcgctttgaatgaaatgcaagcaagtgaacacagctggtggtat 74
Query: 74 ctcagtggcc 83
| ||||||||
Sbjct: 75 c-cagtggcc 83
>36472_dme-mir-317:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 60/70 (85%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttgcat----tcgaaactagtgaacacagctggtggtat 73
|||||||||||||||||||||||| || | || | |||||||||||||||||||||
Sbjct: 15 gggatacaccctgtgctcgctttgaatgaaatgcaagcaagtgaacacagctggtggtat 74
Query: 74 ctcagtggcc 83
| ||||||||
Sbjct: 75 c-cagtggcc 83
>37184_dse-mir-317:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 60/70 (85%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttgcat----tcgaaactagtgaacacagctggtggtat 73
|||||||||||||||||||||||| || | || | |||||||||||||||||||||
Sbjct: 15 gggatacaccctgtgctcgctttgaatgaaatgcaagcaagtgaacacagctggtggtat 74
Query: 74 ctcagtggcc 83
| ||||||||
Sbjct: 75 c-cagtggcc 83
>37260_dsi-mir-317:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 60/70 (85%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttgcat----tcgaaactagtgaacacagctggtggtat 73
|||||||||||||||||||||||| || | || | |||||||||||||||||||||
Sbjct: 15 gggatacaccctgtgctcgctttgaatgaaatgcaagcaagtgaacacagctggtggtat 74
Query: 74 ctcagtggcc 83
| ||||||||
Sbjct: 75 c-cagtggcc 83
>37555_dya-mir-317:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 60/70 (85%), Gaps = 5/70 (7%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttgcat----tcgaaactagtgaacacagctggtggtat 73
|||||||||||||||||||||||| || | || | |||||||||||||||||||||
Sbjct: 15 gggatacaccctgtgctcgctttgaatgaaatgcaagcaagtgaacacagctggtggtat 74
Query: 74 ctcagtggcc 83
| ||||||||
Sbjct: 75 c-cagtggcc 83
>36817_dmo-mir-317:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttg 41
||||||||||||||||||||||||
Sbjct: 14 gggatacaccctgtgctcgctttg 37
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 53 agtgaacacagctggtggtatc 74
||||||||||||||||||||||
Sbjct: 51 agtgaacacagctggtggtatc 72
>36892_dpe-mir-317-1:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttg 41
||||||||||||||||||||||||
Sbjct: 14 gggatacaccctgtgctcgctttg 37
>36893_dpe-mir-317-2:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttg 41
||||||||||||||||||||||||
Sbjct: 14 gggatacaccctgtgctcgctttg 37
>36976_dps-mir-317:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 gggatacaccctgtgctcgctttg 41
||||||||||||||||||||||||
Sbjct: 14 gggatacaccctgtgctcgctttg 37
>38776_cte-mir-317:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctc 76
|||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatctc 82
>35087_api-mir-317:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 agtgaacacagctggtggtatct 75
|||||||||||||||||||||||
Sbjct: 55 agtgaacacagctggtggtatct 77
>36311_dgr-mir-317:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 4e-06
Identities = 30/31 (96%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 53 agtgaacacagctggtggtatctcagtggcc 83
|||||||||||||||||||||| ||||||||
Sbjct: 54 agtgaacacagctggtggtatc-cagtggcc 83
>38886_lgi-mir-317:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatct 75
||||||||||||||||||||||
Sbjct: 60 gtgaacacagctggtggtatct 81
>34987_isc-mir-317:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 54 gtgaacacagctggtggtatctcagt 79
|||||||||||||||||||| |||||
Sbjct: 60 gtgaacacagctggtggtatatcagt 85
