miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36758_dmo-mir-5:mirbase
Length = 72
Score = 99.6 bits (50), Expect = 2e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttaatcgaccgttacatatcacagtgattttcc 62
Query: 61 tttata 66
||||||
Sbjct: 63 tttata 68
>36831_dpe-mir-5:mirbase
Length = 72
Score = 99.6 bits (50), Expect = 2e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttaattcaccgttacatatcacagtgattttcc 62
Query: 61 tttata 66
||||||
Sbjct: 63 tttata 68
>36907_dps-mir-5:mirbase
Length = 72
Score = 99.6 bits (50), Expect = 2e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttaattcaccgttacatatcacagtgattttcc 62
Query: 61 tttata 66
||||||
Sbjct: 63 tttata 68
>37334_dvi-mir-5:mirbase
Length = 70
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 2 taaaaggaacgatcgttgtgatatgcgttcattaaccgttacatatcacagtgattttcc 61
Query: 61 tttata 66
||||||
Sbjct: 62 tttata 67
>36244_dgr-mir-5-1:mirbase
Length = 73
Score = 85.7 bits (43), Expect = 3e-18
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccc-tcgttacatatcacagtgattttc 59
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttcattaaatcgttacatatcacagtgattttc 62
Query: 60 ctttata 66
|||||||
Sbjct: 63 ctttata 69
>36245_dgr-mir-5-2:mirbase
Length = 73
Score = 85.7 bits (43), Expect = 3e-18
Identities = 62/67 (92%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccc-tcgttacatatcacagtgattttc 59
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttcattaaatcgttacatatcacagtgattttc 62
Query: 60 ctttata 66
|||||||
Sbjct: 63 ctttata 69
>36160_der-mir-5:mirbase
Length = 64
Score = 81.8 bits (41), Expect = 5e-17
Identities = 61/67 (91%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||
Sbjct: 1 taaaaggaacgatcgttgtgatatgcgttgttccc---taacatatcacagtgattttcc 57
Query: 61 tttataa 67
|||||||
Sbjct: 58 tttataa 64
>37488_dya-mir-5:mirbase
Length = 64
Score = 81.8 bits (41), Expect = 5e-17
Identities = 61/67 (91%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||
Sbjct: 1 taaaaggaacgatcgttgtgatatgcgttattccc---taacatatcacagtgattttcc 57
Query: 61 tttataa 67
|||||||
Sbjct: 58 tttataa 64
>37409_dwi-mir-5:mirbase
Length = 73
Score = 77.8 bits (39), Expect = 8e-16
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtt-tatccctcgttacatatcacagtgattttc 59
||||||||||||||||||||||||||||| || | ||||| |||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgcgttagattcaccgttatatatcacagtgattttc 62
Query: 60 ctttata 66
|||||||
Sbjct: 63 ctttata 69
>36335_dme-mir-5:mirbase
Length = 69
Score = 65.9 bits (33), Expect = 3e-12
Identities = 59/67 (88%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||| ||| | ||| ||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgagttgtttccta---acatatcacagtgattttcc 59
Query: 61 tttataa 67
|||||||
Sbjct: 60 tttataa 66
>36336_dme-mir-5:mirbase
Length = 69
Score = 65.9 bits (33), Expect = 3e-12
Identities = 59/67 (88%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||| ||| | ||| ||||||||||||||||||||
Sbjct: 3 taaaaggaacgatcgttgtgatatgagttgtttccta---acatatcacagtgattttcc 59
Query: 61 tttataa 67
|||||||
Sbjct: 60 tttataa 66
>37120_dse-mir-5:mirbase
Length = 64
Score = 65.9 bits (33), Expect = 3e-12
Identities = 59/67 (88%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 1 taaaaggaacgatcgttgtgatatgagttgttcccga---acatatcacagtgattttcc 57
Query: 61 tttataa 67
|||||||
Sbjct: 58 tttataa 64
>37198_dsi-mir-5:mirbase
Length = 63
Score = 65.9 bits (33), Expect = 3e-12
Identities = 58/66 (87%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 1 taaaaggaacgatcgttgtgatatgcgtttatccctcgttacatatcacagtgattttcc 60
||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 1 taaaaggaacgatcgttgtgatatgagttgttccca----acatatcacagtgattttcc 56
Query: 61 tttata 66
||||||
Sbjct: 57 tttata 62
