miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>36315_dme-bantam:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>36316_dme-bantam:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>37109_dse-bantam:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>37188_dsi-bantam:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>37400_dwi-bantam:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>37478_dya-bantam:mirbase
          Length = 81

 Score =  161 bits (81), Expect = 9e-41
 Identities = 81/81 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>36073_dan-bantam:mirbase
          Length = 81

 Score =  153 bits (77), Expect = 2e-38
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgttttttatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>36232_dgr-bantam:mirbase
          Length = 81

 Score =  153 bits (77), Expect = 2e-38
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcagacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>36821_dpe-bantam:mirbase
          Length = 81

 Score =  153 bits (77), Expect = 2e-38
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgttttttatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>36897_dps-bantam:mirbase
          Length = 81

 Score =  153 bits (77), Expect = 2e-38
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgttttttatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>37325_dvi-bantam:mirbase
          Length = 81

 Score =  153 bits (77), Expect = 2e-38
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttcatacaagtgagatcat 60
          ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtatttcatacaagtgagatcat 60

                               
Query: 61 tttgaaagctgattttgtcaa 81
          |||||||||||||||||||||
Sbjct: 61 tttgaaagctgattttgtcaa 81




>36749_dmo-bantam:mirbase
          Length = 82

 Score =  139 bits (70), Expect = 3e-34
 Identities = 80/82 (97%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  atttgactacgaaaccggttttcgatttggtttgactg-tttttcatacaagtgagatca 59
          |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1  atttgactacgaaaccggttttcgatttggtttgactgtttttttatacaagtgagatca 60

                                
Query: 60 ttttgaaagctgattttgtcaa 81
          ||||||||||||||||||||||
Sbjct: 61 ttttgaaagctgattttgtcaa 82




>35268_aga-bantam:mirbase
          Length = 111

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 47 acaagtgagatcattttgaaagctgattttgt 78
          ||||||||||||| ||||||||||||||||||
Sbjct: 65 acaagtgagatcactttgaaagctgattttgt 96




>35163_aae-bantam:mirbase
          Length = 71

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 50 agtgagatcattttgaaagctgatttt 76
          |||||||||||||||||||||||||||
Sbjct: 45 agtgagatcattttgaaagctgatttt 71




>35164_aae-bantam:mirbase
          Length = 71

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 50 agtgagatcattttgaaagctgatttt 76
          |||||||||||||||||||||||||||
Sbjct: 45 agtgagatcattttgaaagctgatttt 71




>36001_cqu-bantam:mirbase
          Length = 70

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 50 agtgagatcattttgaaagctgatttt 76
          |||||||||||||||||||||||||||
Sbjct: 44 agtgagatcattttgaaagctgatttt 70




>34957_isc-bantam:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 61 tgagatcattgtgaaagctgattttgt 87




>34994_dpu-bantam:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 61 tgagatcattgtgaaagctgattttgt 87




>35336_ame-bantam:mirbase
          Length = 87

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 50 tgagatcattgtgaaagctgattttgt 76




>37628_nvi-bantam:mirbase
          Length = 87

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 50 tgagatcattgtgaaagctgattttgt 76




>37681_tca-bantam:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78




>37682_tca-bantam:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 52 tgagatcattttgaaagctgattttgt 78
          |||||||||| ||||||||||||||||
Sbjct: 52 tgagatcattgtgaaagctgattttgt 78