miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37366_dvi-mir-263b:mirbase
Length = 71
Score = 105 bits (53), Expect = 4e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 6 catcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgc 65
||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 3 catcttggcactgggagaattcacagtcgattacataatattctgtggttctgcgggtgc 62
Query: 66 caaactgta 74
|||| ||||
Sbjct: 63 caaaatgta 71
>36114_dan-mir-263b:mirbase
Length = 89
Score = 87.7 bits (44), Expect = 1e-18
Identities = 59/63 (93%), Gaps = 2/63 (3%)
Strand = Plus / Plus
Query: 7 atcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcc 66
|||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||
Sbjct: 13 atcttggcactgggagaattcacagttgattttat--tattctgtggttctgcgggtgcc 70
Query: 67 aaa 69
|||
Sbjct: 71 aaa 73
>36192_der-mir-263b:mirbase
Length = 89
Score = 85.7 bits (43), Expect = 4e-18
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcca 67
||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgattttat--tattctgtggttctgcgggtgcca 72
Query: 68 aa 69
||
Sbjct: 73 aa 74
>36866_dpe-mir-263b:mirbase
Length = 92
Score = 85.7 bits (43), Expect = 4e-18
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcc 66
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggttttcatatattctgtggttctgcgggtgcc 73
>36945_dps-mir-263b:mirbase
Length = 91
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcca 67
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttggtttccatatattctgtggttctgcgggtgcca 74
Query: 68 aa 69
||
Sbjct: 75 aa 76
>36407_dme-mir-263b:mirbase
Length = 90
Score = 77.8 bits (39), Expect = 1e-15
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcca 67
||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgactttat--tattctgtggttctgcgggtgcca 72
Query: 68 aa 69
||
Sbjct: 73 aa 74
>36408_dme-mir-263b:mirbase
Length = 90
Score = 77.8 bits (39), Expect = 1e-15
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcca 67
||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgactttat--tattctgtggttctgcgggtgcca 72
Query: 68 aa 69
||
Sbjct: 73 aa 74
>37520_dya-mir-263b-1:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcca 67
||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 14 tcttggcactgggagaattcacagttgactttat--tattctgtggttctgcgggtgcca 71
Query: 68 aa 69
||
Sbjct: 72 aa 73
>37521_dya-mir-263b-2:mirbase
Length = 88
Score = 77.8 bits (39), Expect = 1e-15
Identities = 57/62 (91%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcca 67
||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 14 tcttggcactgggagaattcacagttgactttat--tattctgtggttctgcgggtgcca 71
Query: 68 aa 69
||
Sbjct: 72 aa 73
>37445_dwi-mir-263b:mirbase
Length = 70
Score = 71.9 bits (36), Expect = 6e-14
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 7 atcttggcactgggagaattcacagttg---gttatataatattctgtggttctgcgggt 63
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 1 atcttggcactgggagaattcacagttgattcttattcgatattctgtggttctgcgggt 60
Query: 64 gccaaa 69
||||||
Sbjct: 61 gccaaa 66
>37152_dse-mir-263b:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 2e-13
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcca 67
||||||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgacttgat--tattctgtggttctgcgggtgcca 72
Query: 68 aa 69
||
Sbjct: 73 aa 74
>37231_dsi-mir-263b:mirbase
Length = 90
Score = 69.9 bits (35), Expect = 2e-13
Identities = 56/62 (90%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacagttggttatataatattctgtggttctgcgggtgcca 67
||||||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 15 tcttggcactgggagaattcacagttgacttgat--tattctgtggttctgcgggtgcca 72
Query: 68 aa 69
||
Sbjct: 73 aa 74
>35298_aga-mir-263b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 cttggcactgggagaattcacagt 32
||||||||||||||||||||||||
Sbjct: 16 cttggcactgggagaattcacagt 39
>35203_aae-mir-263b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 cttggcactgggagaattcacag 31
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>35546_bmo-mir-263b:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 cttggcactgggagaattcacag 31
|||||||||||||||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>35378_ame-mir-263b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacag 31
|||||||||||| |||||||||||
Sbjct: 15 tcttggcactggaagaattcacag 38
>37585_ngi-mir-263b:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacag 31
|||||||||||| |||||||||||
Sbjct: 14 tcttggcactggaagaattcacag 37
>37616_nlo-mir-263b:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacag 31
|||||||||||| |||||||||||
Sbjct: 14 tcttggcactggaagaattcacag 37
>37658_nvi-mir-263b:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 8 tcttggcactgggagaattcacag 31
|||||||||||| |||||||||||
Sbjct: 9 tcttggcactggaagaattcacag 32
>35020_dpu-mir-263b:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 cttggcactgggagaattcacag 31
||||||||||| |||||||||||
Sbjct: 7 cttggcactggaagaattcacag 29
>35074_api-mir-263b:mirbase
Length = 62
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 cttggcactgggagaattcacag 31
||||||||||| |||||||||||
Sbjct: 1 cttggcactggaagaattcacag 23
>37764_tca-mir-263b:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 cttggcactgggagaattcacag 31
||||||||||| |||||||||||
Sbjct: 10 cttggcactggaagaattcacag 32
>37763_tca-mir-263b:mirbase
Length = 75
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 9 cttggcactgggagaattcacag 31
||||||||||| |||||||||||
Sbjct: 10 cttggcactggaagaattcacag 32
