miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36085_dan-mir-6-3:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 3e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 36 catttatatcacagtggctgttcttttt 63
||||||||||||||||||||||||||||
Sbjct: 43 catttatatcacagtggctgttcttttt 70
>36161_der-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttgta 71
>36163_der-mir-6-3:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 37 atttatatcacagtggctgttcttttt 63
|||||||||||||||||||||||||||
Sbjct: 48 atttatatcacagtggctgttcttttt 74
>36246_dgr-mir-6-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 44 tatatcacagtggctgttctttttgta 70
>36249_dgr-mir-6-4:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 44 tatatcacagtggctgttctttttgta 70
>36337_dme-mir-6-1:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 50 tatatcacagtggctgttctttttgta 76
>36338_dme-mir-6-1:mirbase
Length = 82
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 50 tatatcacagtggctgttctttttgta 76
>36341_dme-mir-6-3:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 37 atttatatcacagtggctgttcttttt 63
|||||||||||||||||||||||||||
Sbjct: 48 atttatatcacagtggctgttcttttt 74
>36342_dme-mir-6-3:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 37 atttatatcacagtggctgttcttttt 63
|||||||||||||||||||||||||||
Sbjct: 48 atttatatcacagtggctgttcttttt 74
>36833_dpe-mir-6-2:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 37 atttatatcacagtggctgttcttttt 63
|||||||||||||||||||||||||||
Sbjct: 48 atttatatcacagtggctgttcttttt 74
>36832_dpe-mir-6-1:mirbase
Length = 69
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 43 tatatcacagtggctgttctttttgta 69
>36908_dps-mir-6-1:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 48 tatatcacagtggctgttctttttgta 74
>36910_dps-mir-6-3:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 37 atttatatcacagtggctgttcttttt 63
|||||||||||||||||||||||||||
Sbjct: 48 atttatatcacagtggctgttcttttt 74
>37121_dse-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttgta 71
>37123_dse-mir-6-3:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 37 atttatatcacagtggctgttcttttt 63
|||||||||||||||||||||||||||
Sbjct: 48 atttatatcacagtggctgttcttttt 74
>37199_dsi-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttgta 71
>37201_dsi-mir-6-3:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 37 atttatatcacagtggctgttcttttt 63
|||||||||||||||||||||||||||
Sbjct: 48 atttatatcacagtggctgttcttttt 74
>37335_dvi-mir-6-1:mirbase
Length = 70
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 44 tatatcacagtggctgttctttttgta 70
>37489_dya-mir-6-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttgta 66
|||||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttgta 71
>37491_dya-mir-6-3:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 37 atttatatcacagtggctgttcttttt 63
|||||||||||||||||||||||||||
Sbjct: 48 atttatatcacagtggctgttcttttt 74
>36248_dgr-mir-6-3:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 tttatatcacagtggctgttcttttt 63
||||||||||||||||||||||||||
Sbjct: 46 tttatatcacagtggctgttcttttt 71
>36251_dgr-mir-6-6:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 tttatatcacagtggctgttcttttt 63
||||||||||||||||||||||||||
Sbjct: 46 tttatatcacagtggctgttcttttt 71
>36761_dmo-mir-6-3:mirbase
Length = 78
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 tttatatcacagtggctgttcttttt 63
||||||||||||||||||||||||||
Sbjct: 48 tttatatcacagtggctgttcttttt 73
>37337_dvi-mir-6-3:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 38 tttatatcacagtggctgttcttttt 63
||||||||||||||||||||||||||
Sbjct: 45 tttatatcacagtggctgttcttttt 70
>36083_dan-mir-6-1:mirbase
Length = 68
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 41 tatatcacagtggctgttctttttg 65
>36084_dan-mir-6-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 56 tatatcacagtggctgttctttttg 80
>36162_der-mir-6-2:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 45 tatatcacagtggctgttctttttg 69
>36247_dgr-mir-6-2:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttctttttg 75
>36250_dgr-mir-6-5:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 51 tatatcacagtggctgttctttttg 75
>36339_dme-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>36340_dme-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>36760_dmo-mir-6-2:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 53 tatatcacagtggctgttctttttg 77
>36834_dpe-mir-6-3:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 56 tatatcacagtggctgttctttttg 80
>36909_dps-mir-6-2:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 56 tatatcacagtggctgttctttttg 80
>37122_dse-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>37200_dsi-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>37410_dwi-mir-6-1:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 41 atatcacagtggctgttctttttgt 65
|||||||||||||||||||||||||
Sbjct: 44 atatcacagtggctgttctttttgt 68
>37411_dwi-mir-6-2:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 67 tatatcacagtggctgttctttttg 91
>37490_dya-mir-6-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttctttttg 64
|||||||||||||||||||||||||
Sbjct: 46 tatatcacagtggctgttctttttg 70
>37336_dvi-mir-6-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 41 atatcacagtggctgttctttttg 64
||||||||||||||||||||||||
Sbjct: 53 atatcacagtggctgttctttttg 76
>37412_dwi-mir-6-3:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 7e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 tatatcacagtggctgttcttttt 63
||||||||||||||||||||||||
Sbjct: 50 tatatcacagtggctgttcttttt 73
