miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36760_dmo-mir-6-2:mirbase
Length = 81
Score = 69.9 bits (35), Expect = 3e-13
Identities = 72/82 (87%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 1 taaccgcagggaactgctgctgctgatatactgtatagattatatc--gattccatatca 58
|||||||||||||||||||||||||||||||| ||| ||| | || | || ||||||
Sbjct: 1 taaccgcagggaactgctgctgctgatatactatatgtatt-tgtcagtactctatatca 59
Query: 59 cagtggctgttctttttggttg 80
||||||||||||||||||||||
Sbjct: 60 cagtggctgttctttttggttg 81
>36162_der-mir-6-2:mirbase
Length = 73
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggttg 80
||||||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttggttg 73
>36247_dgr-mir-6-2:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggttg 80
||||||||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttctttttggttg 79
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 taaccgcagggaactgctgctgctgatatac 31
||||| |||||||||||||||||||||||||
Sbjct: 1 taaccacagggaactgctgctgctgatatac 31
>36250_dgr-mir-6-5:mirbase
Length = 79
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggttg 80
||||||||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttctttttggttg 79
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 taaccgcagggaactgctgctgctgatatac 31
||||| |||||||||||||||||||||||||
Sbjct: 1 taaccacagggaactgctgctgctgatatac 31
>36339_dme-mir-6-2:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggttg 80
||||||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttggttg 74
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 8 agggaactgctgctgctgatata 30
|||||||| ||||||||||||||
Sbjct: 8 agggaacttctgctgctgatata 30
>36340_dme-mir-6-2:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggttg 80
||||||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttggttg 74
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 8 agggaactgctgctgctgatata 30
|||||||| ||||||||||||||
Sbjct: 8 agggaacttctgctgctgatata 30
>37122_dse-mir-6-2:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggttg 80
||||||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttggttg 74
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 taaccgcagggaactgctgctgctgatata 30
||||| ||||||||| ||||||||||||||
Sbjct: 1 taaccccagggaacttctgctgctgatata 30
>37200_dsi-mir-6-2:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggttg 80
||||||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttggttg 74
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 taaccgcagggaactgctgctgctgatata 30
||||| ||||||||| ||||||||||||||
Sbjct: 1 taaccccagggaacttctgctgctgatata 30
>37490_dya-mir-6-2:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggttg 80
||||||||||||||||||||||||||||
Sbjct: 47 atatcacagtggctgttctttttggttg 74
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 taaccgcagggaactgctgctgctgatata 30
|||||||||||||| ||||||||||||||
Sbjct: 1 taaccgcagggaacctctgctgctgatata 30
>36834_dpe-mir-6-3:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggtt 79
|||||||||||||||||||||||||||
Sbjct: 57 atatcacagtggctgttctttttggtt 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 2 aaccgcagggaactgctgctgctgatata 30
||||||||||||| |||||||||||||||
Sbjct: 3 aaccgcagggaaccgctgctgctgatata 31
>36909_dps-mir-6-2:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggtt 79
|||||||||||||||||||||||||||
Sbjct: 57 atatcacagtggctgttctttttggtt 83
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 2 aaccgcagggaactgctgctgctgatata 30
||||||||||||| |||||||||||||||
Sbjct: 3 aaccgcagggaaccgctgctgctgatata 31
>37411_dwi-mir-6-2:mirbase
Length = 94
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttggtt 79
|||||||||||||||||||||||||||
Sbjct: 68 atatcacagtggctgttctttttggtt 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 accgcagggaactgctgctgctgatata 30
|||||||||||||| ||||||||||||
Sbjct: 1 accgcagggaactgtcgctgctgatata 28
>36084_dan-mir-6-2:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttgg 77
|||||||||||||||||||||||||
Sbjct: 57 atatcacagtggctgttctttttgg 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 cagggaactgctgctgctgatata 30
|||||||||| |||||||||||||
Sbjct: 7 cagggaactgttgctgctgatata 30
>37410_dwi-mir-6-1:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 catatcacagtggctgttctttttg 76
|||||||||||||||||||||||||
Sbjct: 43 catatcacagtggctgttctttttg 67
>36083_dan-mir-6-1:mirbase
Length = 68
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 42 atatcacagtggctgttctttttg 65
>36161_der-mir-6-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttg 69
>36246_dgr-mir-6-1:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 45 atatcacagtggctgttctttttg 68
>36249_dgr-mir-6-4:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 45 atatcacagtggctgttctttttg 68
>36337_dme-mir-6-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 51 atatcacagtggctgttctttttg 74
>36338_dme-mir-6-1:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 51 atatcacagtggctgttctttttg 74
>36759_dmo-mir-6-1:mirbase
Length = 66
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 41 atatcacagtggctgttctttttg 64
>36832_dpe-mir-6-1:mirbase
Length = 69
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 44 atatcacagtggctgttctttttg 67
>36908_dps-mir-6-1:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 49 atatcacagtggctgttctttttg 72
>37121_dse-mir-6-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttg 69
>37199_dsi-mir-6-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttg 69
>37335_dvi-mir-6-1:mirbase
Length = 70
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 45 atatcacagtggctgttctttttg 68
>37489_dya-mir-6-1:mirbase
Length = 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttctttttg 76
||||||||||||||||||||||||
Sbjct: 46 atatcacagtggctgttctttttg 69
>36085_dan-mir-6-3:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 48 atatcacagtggctgttcttttt 70
>36163_der-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>36248_dgr-mir-6-3:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 49 atatcacagtggctgttcttttt 71
>36251_dgr-mir-6-6:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 49 atatcacagtggctgttcttttt 71
>36341_dme-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>36342_dme-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>36761_dmo-mir-6-3:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 51 atatcacagtggctgttcttttt 73
>36833_dpe-mir-6-2:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>36910_dps-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>37123_dse-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>37201_dsi-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
>37337_dvi-mir-6-3:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 48 atatcacagtggctgttcttttt 70
>37412_dwi-mir-6-3:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 51 atatcacagtggctgttcttttt 73
>37491_dya-mir-6-3:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 atatcacagtggctgttcttttt 75
|||||||||||||||||||||||
Sbjct: 52 atatcacagtggctgttcttttt 74
