miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36197_der-mir-277:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36417_dme-mir-277:mirbase
Length = 100
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36418_dme-mir-277:mirbase
Length = 100
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>37157_dse-mir-277:mirbase
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
Query: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36119_dan-mir-277:mirbase
Length = 98
Score = 170 bits (86), Expect = 1e-43
Identities = 95/98 (96%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaacattctgaagcttgta 60
Query: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36871_dpe-mir-277:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
|||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1 ttgaaggttttgggttgcgtgtcaggagtgcatttgcactgaaacattctgaagcttgta 60
Query: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>36951_dps-mir-277:mirbase
Length = 100
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
|||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1 ttgaaggttttgggttgcgtgtcaggagtgcatttgcactgaaacattctgaagcttgta 60
Query: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
>37235_dsi-mir-277:mirbase
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 94/98 (95%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatccaaagcatgta 60
Query: 61 aatgcactatctggtacgacattccagaacgtacaatc 98
|||||| ||| |||||||||||||||||||||||||||
Sbjct: 61 aatgcattatttggtacgacattccagaacgtacaatc 98
>37450_dwi-mir-277:mirbase
Length = 99
Score = 149 bits (75), Expect = 4e-37
Identities = 94/99 (94%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaactatct-gaagcatgt 59
|||||||||||||||||||||||||||||||||||||||||||| | ||| |||| |||
Sbjct: 1 ttgaaggttttgggctgcgtgtcaggagtgcatttgcactgaaaatttctaaaagcttgt 60
Query: 60 aaatgcactatctggtacgacattccagaacgtacaatc 98
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgcactatctggtacgacattccagaacgtacaatc 99
>36794_dmo-mir-277:mirbase
Length = 88
Score = 147 bits (74), Expect = 2e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 7 gttttgggctgcgtgtcaggagtgcatttgcactgaaactatctgaagcatgtaaatgca 66
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 3 gttttgggctgcgtgtcaggagtgcatttgcactgaaacattctgaagcttgtaaatgca 62
Query: 67 ctatctggtacgacattccagaacgt 92
||||||||||||||||||||||||||
Sbjct: 63 ctatctggtacgacattccagaacgt 88
>36286_dgr-mir-277:mirbase
Length = 89
Score = 133 bits (67), Expect = 3e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 7 gttttgggctgcgtgtcaggagtgcatttgcactgaaactatctg-aagcatgtaaatgc 65
||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 3 gttttgggctgcgtgtcaggagtgcatttgcactgaaacattctgaaagcttgtaaatgc 62
Query: 66 actatctggtacgacattccagaacgt 92
|||||||||||||||||||||||||||
Sbjct: 63 actatctggtacgacattccagaacgt 89
>37371_dvi-mir-277:mirbase
Length = 89
Score = 133 bits (67), Expect = 3e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 7 gttttgggctgcgtgtcaggagtgcatttgcactgaaactatctg-aagcatgtaaatgc 65
||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 3 gttttgggctgcgtgtcaggagtgcatttgcactgaaacattctgaaagcttgtaaatgc 62
Query: 66 actatctggtacgacattccagaacgt 92
|||||||||||||||||||||||||||
Sbjct: 63 actatctggtacgacattccagaacgt 89
>35207_aae-mir-277:mirbase
Length = 95
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgacattccagaa 89
|||||||||||||||||||||||||||||||||
Sbjct: 60 tgtaaatgcactatctggtacgacattccagaa 92
>35302_aga-mir-277:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgacattccagaa 89
|||||||||||||||||||||||||||||||||
Sbjct: 57 tgtaaatgcactatctggtacgacattccagaa 89
>36035_cqu-mir-277:mirbase
Length = 96
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgacattccagaa 89
|||||||||||||||||||||||||||||||||
Sbjct: 61 tgtaaatgcactatctggtacgacattccagaa 93
>35077_api-mir-277:mirbase
Length = 79
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 55 catgtaaatgcactatctggtacgaca 81
|||||||||||||||||||||||||||
Sbjct: 53 catgtaaatgcactatctggtacgaca 79
>35381_ame-mir-277:mirbase
Length = 84
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgacat 82
||||||||||||||||||||||||||
Sbjct: 49 tgtaaatgcactatctggtacgacat 74
>35550_bmo-mir-277:mirbase
Length = 122
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgacat 82
||||||||||||||||||||||||||
Sbjct: 79 tgtaaatgcactatctggtacgacat 104
>37588_ngi-mir-277:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgacat 82
||||||||||||||||||||||||||
Sbjct: 52 tgtaaatgcactatctggtacgacat 77
>37619_nlo-mir-277:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgacat 82
||||||||||||||||||||||||||
Sbjct: 52 tgtaaatgcactatctggtacgacat 77
>37661_nvi-mir-277:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgacat 82
||||||||||||||||||||||||||
Sbjct: 52 tgtaaatgcactatctggtacgacat 77
>37769_tca-mir-277:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgaca 81
|||||||||||||||||||||||||
Sbjct: 51 tgtaaatgcactatctggtacgaca 75
>37770_tca-mir-277:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 57 tgtaaatgcactatctggtacgaca 81
|||||||||||||||||||||||||
Sbjct: 51 tgtaaatgcactatctggtacgaca 75
