miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36207_der-mir-286:mirbase
Length = 98
Score = 170 bits (86), Expect = 1e-43
Identities = 95/98 (96%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaaagaggtttcgatcaagcg 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaggtttcgatcgagcg 60
Query: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
>37243_dsi-mir-286:mirbase
Length = 100
Score = 168 bits (85), Expect = 5e-43
Identities = 97/100 (97%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaaaga--ggtttcgatcaag 58
||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaaagaaaggtttcgatcaag 60
Query: 59 cgaagtgactagaccgaacactcgtgctataattttaaaa 98
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaagtgactagaccgaacactcgtgctataattttaaaa 100
>36436_dme-mir-286:mirbase
Length = 100
Score = 165 bits (83), Expect = 7e-42
Identities = 96/99 (96%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa-agaggtttcgatcaagc 59
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
Query: 60 gaagtgactagaccgaacactcgtgctataattttaaaa 98
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtgactagaccgaacactcgtgctataattttaaaa 99
>36437_dme-mir-286:mirbase
Length = 100
Score = 165 bits (83), Expect = 7e-42
Identities = 96/99 (96%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa-agaggtttcgatcaagc 59
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaagaaaggtttcgattaagc 60
Query: 60 gaagtgactagaccgaacactcgtgctataattttaaaa 98
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtgactagaccgaacactcgtgctataattttaaaa 99
>37167_dse-mir-286:mirbase
Length = 99
Score = 165 bits (83), Expect = 7e-42
Identities = 96/99 (96%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa-agaggtttcgatcaagc 59
||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttccaataaaggtttcgatcaagc 60
Query: 60 gaagtgactagaccgaacactcgtgctataattttaaaa 98
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagtgactagaccgaacactcgtgctataattttaaaa 99
>36129_dan-mir-286:mirbase
Length = 103
Score = 109 bits (55), Expect = 4e-25
Identities = 91/103 (88%), Gaps = 5/103 (4%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaaaga-----ggtttcgatc 55
||||||||||||||||| ||||||||||||| |||||||| || | |||| | | |
Sbjct: 1 ttaaaattgaatggcgattgtcggtatggtcgctttttcacaaaaaaattggttaccaac 60
Query: 56 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 98
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagcgaagtgactagaccgaacactcgtgctataattttaaaa 103
>36880_dpe-mir-286:mirbase
Length = 96
Score = 101 bits (51), Expect = 9e-23
Identities = 86/95 (90%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaaagaggtttcgatcaagcg 60
|||||||| |||||||| ||||||| ||||| |||||| | || |||| ||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt-accag-ggttccgatcaagcg 58
Query: 61 aagtgactagaccgaacactcgtgctataatttta 95
|||||||||||||||||||||||||||||||||||
Sbjct: 59 aagtgactagaccgaacactcgtgctataatttta 93
>36961_dps-mir-286:mirbase
Length = 97
Score = 101 bits (51), Expect = 9e-23
Identities = 86/95 (90%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaaagaggtttcgatcaagcg 60
|||||||| |||||||| ||||||| ||||| |||||| | || |||| ||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtttggtcgcttttt-accag-ggttccgatcaagcg 58
Query: 61 aagtgactagaccgaacactcgtgctataatttta 95
|||||||||||||||||||||||||||||||||||
Sbjct: 59 aagtgactagaccgaacactcgtgctataatttta 93
>36296_dgr-mir-286-1:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36297_dgr-mir-286-2:mirbase
Length = 104
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aagtgactagaccgaacactcgtgctataattttaaaa 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttt 37
|||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttt 37
>36804_dmo-mir-286:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aagtgactagaccgaacactcgtgctataattttaaaa 103
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaa 41
|||||||| |||||||| |||||||||||||||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtctctttttcaa 41
>37381_dvi-mir-286:mirbase
Length = 101
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 61 aagtgactagaccgaacactcgtgctataattttaaaa 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aagtgactagaccgaacactcgtgctataattttaaaa 101
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1 ttaaaattgaatggcgaatgtcggtatggtctctttttcaaa 42
|||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 1 ttaaaattaaatggcgattgtcggtatggtcgctttttcaaa 42
>37460_dwi-mir-286:mirbase
Length = 108
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 61 aagtgactagaccgaacactcgtgctataattttaa 96
||||||||||||||||||||||||||||||||||||
Sbjct: 73 aagtgactagaccgaacactcgtgctataattttaa 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 3 aaaattgaatggcgaatgtcggtatggtctctttttc 39
||||||||||||||| ||||||||| |||||||||||
Sbjct: 1 aaaattgaatggcgattgtcggtatagtctctttttc 37
>35216_aae-mir-286b-1:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 agtgactagaccgaacactcgt 83
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35217_aae-mir-286b-2:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 agtgactagaccgaacactcgt 83
||||||||||||||||||||||
Sbjct: 64 agtgactagaccgaacactcgt 85
>35215_aae-mir-286a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 62 agtgactagaccgaacactcg 82
|||||||||||||||||||||
Sbjct: 61 agtgactagaccgaacactcg 81
>35308_aga-mir-286:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 62 agtgactagaccgaacactcg 82
|||||||||||||||||||||
Sbjct: 59 agtgactagaccgaacactcg 79
