miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37170_dse-mir-289:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
Query: 61 gggtaagtctctcgagcgtttgttggcacgtaaaag 96
||||||||| || |||||||||||||||||||||||
Sbjct: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
>37246_dsi-mir-289:mirbase
Length = 96
Score = 174 bits (88), Expect = 7e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
Query: 61 gggtaagtctctcgagcgtttgttggcacgtaaaag 96
||||||||| || |||||||||||||||||||||||
Sbjct: 61 gggtaagtcacttgagcgtttgttggcacgtaaaag 96
>36440_dme-mir-289:mirbase
Length = 99
Score = 167 bits (84), Expect = 2e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2 agtttacagtaaaataaatatttaagtggagcctgcgacttcagtccctctgactgactg 61
Query: 61 gggtaagtctctcgagcgtttgttggcacgtaaaag 96
||||||||| || |||||||||||||||||||||||
Sbjct: 62 gggtaagtcacttgagcgtttgttggcacgtaaaag 97
>36210_der-mir-289:mirbase
Length = 96
Score = 159 bits (80), Expect = 4e-40
Identities = 92/96 (95%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgactgactg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 agtttacagtaaaataaatatttaagtggagcctgcgactccagtccctctgacggactg 60
Query: 61 gggtaagtctctcgagcgtttgttggcacgtaaaag 96
|||||| || || |||||||||||||||||||||||
Sbjct: 61 gggtaactcacttgagcgtttgttggcacgtaaaag 96
>36132_dan-mir-289:mirbase
Length = 117
Score = 81.8 bits (41), Expect = 8e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgactc 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtttacagtaaaataaatatttaagtggagcctgcgactc 42
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 74 gagcgtttgttggcacgtaaaag 96
|||||||||||||||||||||||
Sbjct: 93 gagcgtttgttggcacgtaaaag 115
>36883_dpe-mir-289:mirbase
Length = 97
Score = 73.8 bits (37), Expect = 2e-14
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgact 59
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 1 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 60
Query: 60 ggggtaagtctctcgagcgtttgttggcacgtaaaag 96
||| ||| || || |||||||||||||||||||||||
Sbjct: 61 gggctaactcacttgagcgtttgttggcacgtaaaag 97
>36964_dps-mir-289:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 2e-14
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 agtttacagtaaaataaatatttaagtggagcctgcgact-ccagtccctctgactgact 59
|||||||||| ||||||||||||||||||||||||||||| | ||| || | ||||
Sbjct: 2 agtttacagtgaaataaatatttaagtggagcctgcgactgggactccagctctccgact 61
Query: 60 ggggtaagtctctcgagcgtttgttggcacgtaaaag 96
||| ||| || || |||||||||||||||||||||||
Sbjct: 62 gggctaactcacttgagcgtttgttggcacgtaaaag 98
