miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36217_der-mir-310a:mirbase
Length = 88
Score = 143 bits (72), Expect = 2e-35
Identities = 84/88 (95%)
Strand = Plus / Plus
Query: 1 acacaaacatttgcaggacgggtcgtgtggcagtgtattgatttcttagctatattgcac 60
||||||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 1 acacaaatatttgcaggacgggtcgtgtgtcaatgtattgatctcttagctatattgcac 60
Query: 61 acttcccgccctttaaatgtccagtgtt 88
||||||||||||||||||||||||||||
Sbjct: 61 acttcccgccctttaaatgtccagtgtt 88
>36457_dme-mir-310:mirbase
Length = 89
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 5 aaacatttgcaggacgggtcgtgtggcagtgtattgatttcttagctatattgcacactt 64
||||||||||||| ||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 6 aaacatttgcagggcgggtcgtgtgtcagtgtatttatatcttagctatattgcacactt 65
Query: 65 cccgccctttaaatgtccagtgtt 88
|||| |||||||||||||| ||||
Sbjct: 66 cccggcctttaaatgtccaatgtt 89
>36458_dme-mir-310:mirbase
Length = 89
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 5 aaacatttgcaggacgggtcgtgtggcagtgtattgatttcttagctatattgcacactt 64
||||||||||||| ||||||||||| ||||||||| || |||||||||||||||||||||
Sbjct: 6 aaacatttgcagggcgggtcgtgtgtcagtgtatttatatcttagctatattgcacactt 65
Query: 65 cccgccctttaaatgtccagtgtt 88
|||| |||||||||||||| ||||
Sbjct: 66 cccggcctttaaatgtccaatgtt 89
>37177_dse-mir-310:mirbase
Length = 89
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 5 aaacatttgcaggacgggtcgtgtggcagtgtattgatttcttagctatattgcacactt 64
||||||||||||||||||||||||| ||||||||| | |||||| |||||||||||||||
Sbjct: 6 aaacatttgcaggacgggtcgtgtgtcagtgtatttacttcttaactatattgcacactt 65
Query: 65 cccgccctttaaatgtccagtgtt 88
|||| |||||||||||||| ||||
Sbjct: 66 cccggcctttaaatgtccaatgtt 89
>37253_dsi-mir-310:mirbase
Length = 89
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 5 aaacatttgcaggacgggtcgtgtggcagtgtattgatttcttagctatattgcacactt 64
||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||
Sbjct: 6 aaacatttgcaggacgggtcgtgtgtcagtatatttacttcttagctatattgcacactt 65
Query: 65 cccgccctttaaatgtccagtgtt 88
|||| |||||||||||||| ||||
Sbjct: 66 cccggcctttaaatgtccaatgtt 89
>36218_der-mir-310b:mirbase
Length = 88
Score = 103 bits (52), Expect = 2e-23
Identities = 79/88 (89%)
Strand = Plus / Plus
Query: 1 acacaaacatttgcaggacgggtcgtgtggcagtgtattgatttcttagctatattgcac 60
||||||| ||||||||||||||||||||| | ||||| || | |||||||||||||||
Sbjct: 1 acacaaatatttgcaggacgggtcgtgtgttaatgtataaatctattagctatattgcac 60
Query: 61 acttcccgccctttaaatgtccagtgtt 88
||||||||| ||||||||||||||||||
Sbjct: 61 acttcccgctctttaaatgtccagtgtt 88
