miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37552_dya-mir-315-2:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
Query: 61 gcaataattgaaaccagataagtg 84
||||||||||||||||||||||||
Sbjct: 61 gcaataattgaaaccagataagtg 84
>36226_der-mir-315:mirbase
Length = 83
Score = 135 bits (68), Expect = 5e-33
Identities = 81/84 (96%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
|||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccct-attatctaacagctggctttcga 59
Query: 61 gcaataattgaaaccagataagtg 84
||||||||||||||||||||||||
Sbjct: 60 gcaataattgaaaccagataagtg 83
>37258_dsi-mir-315:mirbase
Length = 84
Score = 135 bits (68), Expect = 5e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
|||||||||||||||||||||||||||||||||||||| | |||| ||| ||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagcccttattgtttaccagttggctttcga 60
Query: 61 gcaataattgaaaccagataagtg 84
||||||||||||||||||||||||
Sbjct: 61 gcaataattgaaaccagataagtg 84
>36467_dme-mir-315:mirbase
Length = 84
Score = 127 bits (64), Expect = 1e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
|||||||||||||||||||||||||||||||||||| | | |||| ||| ||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccctcattgtttaccagttggctttcga 60
Query: 61 gcaataattgaaaccagataagtg 84
||||||||||||||||||||||||
Sbjct: 61 gcaataattgaaaccagataagtg 84
>36468_dme-mir-315:mirbase
Length = 84
Score = 127 bits (64), Expect = 1e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
|||||||||||||||||||||||||||||||||||| | | |||| ||| ||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccctcattgtttaccagttggctttcga 60
Query: 61 gcaataattgaaaccagataagtg 84
||||||||||||||||||||||||
Sbjct: 61 gcaataattgaaaccagataagtg 84
>36144_dan-mir-315:mirbase
Length = 84
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
|||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagcccttataaattattagctggctttcga 60
Query: 61 gcaataattgaaaccagataagtg 84
|||||||||||||||| |||||||
Sbjct: 61 gcaataattgaaaccaaataagtg 84
>37182_dse-mir-315:mirbase
Length = 82
Score = 113 bits (57), Expect = 2e-26
Identities = 78/84 (92%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
|||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccctta--ttgtaccagttggctttcga 58
Query: 61 gcaataattgaaaccagataagtg 84
||||||||||||||||||||||||
Sbjct: 59 gcaataattgaaaccagataagtg 82
>37471_dwi-mir-315:mirbase
Length = 85
Score = 113 bits (57), Expect = 2e-26
Identities = 79/85 (92%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttacta-tttaacagctggctttcg 59
|||||||||||||||||||||||||||||||||||| | || |||| ||| |||||||||
Sbjct: 1 cacttatataattttgattgttgctcagaaagccctcattactttatcagttggctttcg 60
Query: 60 agcaataattgaaaccagataagtg 84
||||||||||||||||| |||||||
Sbjct: 61 agcaataattgaaaccaaataagtg 85
>36890_dpe-mir-315:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
||||||| || ||||||||||||||||||||||||||| ||| | ||| ||||||||||
Sbjct: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
Query: 61 gcaat 65
|||||
Sbjct: 61 gcaat 65
>36974_dps-mir-315:mirbase
Length = 84
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 cacttatataattttgattgttgctcagaaagcccttactatttaacagctggctttcga 60
||||||| || ||||||||||||||||||||||||||| ||| | ||| ||||||||||
Sbjct: 1 cacttatctatttttgattgttgctcagaaagcccttataattaaccagttggctttcga 60
Query: 61 gcaat 65
|||||
Sbjct: 61 gcaat 65
>36815_dmo-mir-315:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 1e-12
Identities = 72/83 (86%), Gaps = 5/83 (6%)
Strand = Plus / Plus
Query: 3 cttatataattttgattgttgctcagaaagcccttactatttaac---agctggctttcg 59
||||||||||||||||||||||||||||||||| || ||||||| | |||||||||
Sbjct: 3 cttatataattttgattgttgctcagaaagcccgta--atttaacttaacatggctttcg 60
Query: 60 agcaataattgaaaccagataag 82
|| |||||| ||||||| |||||
Sbjct: 61 agtaataatcgaaaccaaataag 83
>36309_dgr-mir-315:mirbase
Length = 82
Score = 60.0 bits (30), Expect = 3e-10
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 6 atataattttgattgttgctcagaaagcccttactatttaacagctggctttcgagcaat 65
||||||||||||||||||||||||||||| || | || ||| ||||||||||| |||
Sbjct: 6 atataattttgattgttgctcagaaagccttt--cacttgacacttggctttcgagtaat 63
Query: 66 aattgaaaccagataag 82
||| ||||||| |||||
Sbjct: 64 aatcgaaaccaaataag 80
>37393_dvi-mir-315a:mirbase
Length = 82
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 5 tatataattttgattgttgctcagaaagccct 36
||||| ||||||||||||||||||||||||||
Sbjct: 5 tatatcattttgattgttgctcagaaagccct 36
>38775_cte-mir-315:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagccctt 37
||||||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagccctt 46
>35225_aae-mir-315:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tatataattttgattgttgctcagaaagcc 34
|||| |||||||||||||||||||||||||
Sbjct: 9 tataaaattttgattgttgctcagaaagcc 38
>35314_aga-mir-315:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tatataattttgattgttgctcagaaagcc 34
|||| |||||||||||||||||||||||||
Sbjct: 1 tataaaattttgattgttgctcagaaagcc 30
>36045_cqu-mir-315:mirbase
Length = 93
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 tatataattttgattgttgctcagaaagcc 34
|||| |||||||||||||||||||||||||
Sbjct: 10 tataaaattttgattgttgctcagaaagcc 39
>38885_lgi-mir-315:mirbase
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 aattttgattgttgctcagaaagcc 34
|||||||||||||||||||||||||
Sbjct: 19 aattttgattgttgctcagaaagcc 43
>34896_sko-mir-315:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagcc 43
>35031_dpu-mir-315:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaaagcc 43
>35085_api-mir-315:mirbase
Length = 65
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 1 ttttgattgttgctcagaaagcc 23
>35392_ame-mir-315:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>37623_nlo-mir-315:mirbase
Length = 75
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>37668_nvi-mir-315:mirbase
Length = 82
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>37798_tca-mir-315:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaaagcc 34
|||||||||||||||||||||||
Sbjct: 12 ttttgattgttgctcagaaagcc 34
>25540_pma-mir-315:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tttgattgttgctcagaaagcc 34
||||||||||||||||||||||
Sbjct: 11 tttgattgttgctcagaaagcc 32
>39129_sme-mir-315:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 cttatataattttgattgttgctc 26
|||||| |||||||||||||||||
Sbjct: 12 cttatagaattttgattgttgctc 35
>34986_isc-mir-315:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 12 ttttgattgttgctcagaa 30
|||||||||||||||||||
Sbjct: 21 ttttgattgttgctcagaa 39
