miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37781_tca-mir-281:mirbase
Length = 67
Score = 58.0 bits (29), Expect = 6e-10
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagtacagtgagtaaactgtcatggagttgctctcttta 57
||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 10 aagagagctatccgtcgacagtatataatttacactgtcatggagttgctctcttta 66
>37782_tca-mir-281:mirbase
Length = 67
Score = 58.0 bits (29), Expect = 6e-10
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagtacagtgagtaaactgtcatggagttgctctcttta 57
||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 10 aagagagctatccgtcgacagtatataatttacactgtcatggagttgctctcttta 66
>35557_bmo-mir-281:mirbase
Length = 77
Score = 54.0 bits (27), Expect = 1e-08
Identities = 53/59 (89%), Gaps = 2/59 (3%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagtacag-tgagtaa-actgtcatggagttgctctcttta 57
||||||||||||||||||||||| | ||| || ||||||||||||||||||||||||
Sbjct: 11 aagagagctatccgtcgacagtattgctgataaacactgtcatggagttgctctcttta 69
>38884_lgi-mir-281:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttta 57
||||||||||||||||||||||||
Sbjct: 59 actgtcatggagttgctctcttta 82
>35081_api-mir-281:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttta 57
||||||||||||||||||||||||
Sbjct: 38 actgtcatggagttgctctcttta 61
>38774_cte-mir-281:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 36 tgtcatggagttgctctctttaa 58
|||||||||||||||||||||||
Sbjct: 62 tgtcatggagttgctctctttaa 84
>24703_bfl-mir-281:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
|||||||||||||||||||||||
Sbjct: 57 actgtcatggagttgctctcttt 79
>35210_aae-mir-281:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagta 23
|||||||||||||||||||||||
Sbjct: 21 aagagagctatccgtcgacagta 43
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttta 57
||||||||||| ||||||||||||
Sbjct: 56 actgtcatggaattgctctcttta 79
>35305_aga-mir-281:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagta 23
|||||||||||||||||||||||
Sbjct: 20 aagagagctatccgtcgacagta 42
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttta 57
||||||||||| ||||||||||||
Sbjct: 55 actgtcatggaattgctctcttta 78
>35386_ame-mir-281:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
|||||||||||||||||||||||
Sbjct: 59 actgtcatggagttgctctcttt 81
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagta 23
||||||||||||| |||||||||
Sbjct: 22 aagagagctatccatcgacagta 44
>36038_cqu-mir-281:mirbase
Length = 107
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagta 23
|||||||||||||||||||||||
Sbjct: 26 aagagagctatccgtcgacagta 48
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttta 57
||||||||||| ||||||||||||
Sbjct: 61 actgtcatggaattgctctcttta 84
>37455_dwi-mir-281-2:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 2e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagtacagt 27
|||||||||||||||||||||| ||||
Sbjct: 15 aagagagctatccgtcgacagtccagt 41
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 63 actgtcatggaattgctctcttt 85
>24852_cin-mir-281:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctctt 55
||||||||||||||||||||||
Sbjct: 64 actgtcatggagttgctctctt 85
>36124_dan-mir-281-2:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 60 actgtcatggaattgctctcttt 82
>36202_der-mir-281-2:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80
>36291_dgr-mir-281-2:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 59 actgtcatggaattgctctcttt 81
>36426_dme-mir-281-2:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80
>36427_dme-mir-281-2:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80
>36799_dmo-mir-281-2:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 59 actgtcatggaattgctctcttt 81
>36876_dpe-mir-281-2:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79
>36956_dps-mir-281-2:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79
>37162_dse-mir-281-2:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80
>37376_dvi-mir-281-2:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 57 actgtcatggaattgctctcttt 79
>37531_dya-mir-281-2:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagt 22
||||||||||||||||||||||
Sbjct: 15 aagagagctatccgtcgacagt 36
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 58 actgtcatggaattgctctcttt 80
>34895_sko-mir-281:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 4e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 35 ctgtcatggagttgctctctt 55
|||||||||||||||||||||
Sbjct: 60 ctgtcatggagttgctctctt 80
>36798_dmo-mir-281-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 aaactgtcatggagttgctctcttt 56
||||||||||||| |||||||||||
Sbjct: 52 aaactgtcatggaattgctctcttt 76
Score = 38.2 bits (19), Expect = 6e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagtacagt 27
||||||||| |||||||||||| ||||
Sbjct: 15 aagagagctgtccgtcgacagtccagt 41
>37454_dwi-mir-281-1:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 aaactgtcatggagttgctctcttt 56
||||||||||||| |||||||||||
Sbjct: 54 aaactgtcatggaattgctctcttt 78
Score = 38.2 bits (19), Expect = 6e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagtacagt 27
||||||||| |||||||||||| ||||
Sbjct: 15 aagagagctgtccgtcgacagtccagt 41
>38122_bma-mir-281:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 33 aactgtcatggagttgctctcttta 57
|||||||||||| ||||||||||||
Sbjct: 50 aactgtcatggaattgctctcttta 74
>25337_csa-mir-281:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 35 ctgtcatggagttgctctct 54
||||||||||||||||||||
Sbjct: 65 ctgtcatggagttgctctct 84
>25536_pma-mir-281a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 36 tgtcatggagttgctctctt 55
||||||||||||||||||||
Sbjct: 55 tgtcatggagttgctctctt 74
>35026_dpu-mir-281:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttta 57
|||||||||||| |||||||||||
Sbjct: 59 actgtcatggagctgctctcttta 82
>36123_dan-mir-281-1:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 52 actgtcatggaattgctctcttt 74
>36201_der-mir-281-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>36290_dgr-mir-281-1:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 6e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagtacagt 27
||||||||| |||||||||||| ||||
Sbjct: 15 aagagagctgtccgtcgacagtccagt 41
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76
>36424_dme-mir-281-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>36425_dme-mir-281-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>36875_dpe-mir-281-1:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76
>36955_dps-mir-281-1:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76
>37161_dse-mir-281-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>37238_dsi-mir-281:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>37375_dvi-mir-281-1:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 6e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagtacagt 27
||||||||| |||||||||||| ||||
Sbjct: 15 aagagagctgtccgtcgacagtccagt 41
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 54 actgtcatggaattgctctcttt 76
>37530_dya-mir-281-1:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 56 actgtcatggaattgctctcttt 78
>37589_ngi-mir-281:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagta 23
||||||||||||| |||||||||
Sbjct: 8 aagagagctatccatcgacagta 30
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 45 actgtcatggacttgctctcttt 67
>37620_nlo-mir-281:mirbase
Length = 73
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagta 23
||||||||||||| |||||||||
Sbjct: 8 aagagagctatccatcgacagta 30
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 45 actgtcatggacttgctctcttt 67
>37663_nvi-mir-281:mirbase
Length = 103
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 aagagagctatccgtcgacagta 23
||||||||||||| |||||||||
Sbjct: 22 aagagagctatccatcgacagta 44
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 34 actgtcatggagttgctctcttt 56
||||||||||| |||||||||||
Sbjct: 59 actgtcatggacttgctctcttt 81
