miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37615_nlo-mir-252:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 aatcccgtcctgttcctaagtactagtgccgcaggagtgactagactgggctagaaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatcccgtcctgttcctaagtactagtgccgcaggagtgactagactgggctagaaatta 60
Query: 61 ccgcgtctcctgctgctcaagtgcttatcaatgg 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgcgtctcctgctgctcaagtgcttatcaatgg 94
>37657_nvi-mir-252:mirbase
Length = 101
Score = 178 bits (90), Expect = 5e-46
Identities = 93/94 (98%)
Strand = Plus / Plus
Query: 1 aatcccgtcctgttcctaagtactagtgccgcaggagtgactagactgggctagaaatta 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 aatcccgtcctgttcctaagtactagtgccgcaggagtgactagattgggctagaaatta 60
Query: 61 ccgcgtctcctgctgctcaagtgcttatcaatgg 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgcgtctcctgctgctcaagtgcttatcaatgg 94
>35376_ame-mir-252:mirbase
Length = 100
Score = 115 bits (58), Expect = 6e-27
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 1 aatcccgtcctgttcctaagtactagtgccgcaggagtgactagactgggctagaaatta 60
||||| ||| ||||| |||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 1 aatcctgtcttgttcataagtactagtgccgcaggagtgactaggttgggttagaaatta 60
Query: 61 ccgcgtctcctgctgctcaagtgcttatcaatgg 94
|| |||||||||||||||||||||||||||||
Sbjct: 61 ccatatctcctgctgctcaagtgcttatcaatgg 94
>37758_tca-mir-252a:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 gtcctgttcctaagtactagtgccgcaggagt 38
|||||||| |||||||||||||||||||||||
Sbjct: 8 gtcctgttactaagtactagtgccgcaggagt 39
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 67 ctcctgctgctcaagtgcttatcaatgg 94
||||||||||||||||||||||||||||
Sbjct: 49 ctcctgctgctcaagtgcttatcaatgg 76
>37757_tca-mir-252a:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 7 gtcctgttcctaagtactagtgccgcaggagt 38
|||||||| |||||||||||||||||||||||
Sbjct: 8 gtcctgttactaagtactagtgccgcaggagt 39
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 67 ctcctgctgctcaagtgcttatcaatgg 94
||||||||||||||||||||||||||||
Sbjct: 49 ctcctgctgctcaagtgcttatcaatgg 76
>35544_bmo-mir-252:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 tgttcctaagtactagtgccgcaggag 37
|||||||||||||||||||||||||||
Sbjct: 11 tgttcctaagtactagtgccgcaggag 37
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 66 tctcctgctgctcaagtgcttatcaatg 93
||||||||||| |||||||||||||||
Sbjct: 50 tctcctgctgcctaagtgcttatcaatg 77
>36403_dme-mir-252:mirbase
Length = 93
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ttcctaagtactagtgccgcaggagt 38
||||||||||||||||||||||||||
Sbjct: 13 ttcctaagtactagtgccgcaggagt 38
>36404_dme-mir-252:mirbase
Length = 93
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ttcctaagtactagtgccgcaggagt 38
||||||||||||||||||||||||||
Sbjct: 13 ttcctaagtactagtgccgcaggagt 38
>36943_dps-mir-252:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ttcctaagtactagtgccgcaggagt 38
||||||||||||||||||||||||||
Sbjct: 18 ttcctaagtactagtgccgcaggagt 43
>37229_dsi-mir-252:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 13 ttcctaagtactagtgccgcaggagt 38
||||||||||||||||||||||||||
Sbjct: 27 ttcctaagtactagtgccgcaggagt 52
>34892_sko-mir-252a:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 ctaagtactagtgccgcaggagt 38
|||||||||||||||||||||||
Sbjct: 21 ctaagtactagtgccgcaggagt 43
>38768_cte-mir-252a:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ctaagtactagtgccgcaggag 37
||||||||||||||||||||||
Sbjct: 21 ctaagtactagtgccgcaggag 42
>35017_dpu-mir-252a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 12 gttcctaagtactagtgccgcaggag 37
||||||||||||| ||||||||||||
Sbjct: 17 gttcctaagtactcgtgccgcaggag 42
>35201_aae-mir-252:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ctaagtactagtgccgcaggag 37
||||||||||||||||||||||
Sbjct: 11 ctaagtactagtgccgcaggag 32
>36029_cqu-mir-252:mirbase
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 16 ctaagtactagtgccgcaggag 37
||||||||||||||||||||||
Sbjct: 11 ctaagtactagtgccgcaggag 32
>35071_api-mir-252a:mirbase
Length = 65
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 ctaagtactagtgccgcaggagtga 40
||||||||||||||||| |||||||
Sbjct: 1 ctaagtactagtgccgcgggagtga 25
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 66 tctcctgctgctcaagtgcttatca 90
|||||||| ||||||||||||||||
Sbjct: 41 tctcctgcagctcaagtgcttatca 65
>24700_bfl-mir-252a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 16 ctaagtactagtgccgcagg 35
||||||||||||||||||||
Sbjct: 21 ctaagtactagtgccgcagg 40
