miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>37616_nlo-mir-263b:mirbase
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 aggttctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggttctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtg 60
Query: 61 gatcttgcaatgccattacccgctgg 86
||||||||||||||||||||||||||
Sbjct: 61 gatcttgcaatgccattacccgctgg 86
>37658_nvi-mir-263b:mirbase
Length = 81
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 6 ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtggatct 60
Query: 66 tgcaatgccattacccgctgg 86
|||||||||||||||||||||
Sbjct: 61 tgcaatgccattacccgctgg 81
>35378_ame-mir-263b:mirbase
Length = 91
Score = 107 bits (54), Expect = 1e-24
Identities = 71/76 (93%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 1 aggttctggcgggtcttggcactggaagaattcacagatgtgcggttgtgtgtaatcgtg 60
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 2 aggttctggcgggtcttggcactggaagaattcacagatgtgc---agtgtataatcgtg 58
Query: 61 gatcttgcaatgccat 76
||||||||||||||||
Sbjct: 59 gatcttgcaatgccat 74
>37764_tca-mir-263b:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 cttggcactggaagaattcacagat 39
|||||||||||||||||||||||||
Sbjct: 10 cttggcactggaagaattcacagat 34
>37763_tca-mir-263b:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 cttggcactggaagaattcacagat 39
|||||||||||||||||||||||||
Sbjct: 10 cttggcactggaagaattcacagat 34
>35020_dpu-mir-263b:mirbase
Length = 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cttggcactggaagaattcacaga 38
||||||||||||||||||||||||
Sbjct: 7 cttggcactggaagaattcacaga 30
>35074_api-mir-263b:mirbase
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cttggcactggaagaattcacaga 38
||||||||||||||||||||||||
Sbjct: 1 cttggcactggaagaattcacaga 24
>36192_der-mir-263b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 gtcttggcactggaagaattcacag 37
||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38
>36407_dme-mir-263b:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 gtcttggcactggaagaattcacag 37
||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38
>36408_dme-mir-263b:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 gtcttggcactggaagaattcacag 37
||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38
>37152_dse-mir-263b:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 gtcttggcactggaagaattcacag 37
||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38
>37231_dsi-mir-263b:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 gtcttggcactggaagaattcacag 37
||||||||||||| |||||||||||
Sbjct: 14 gtcttggcactgggagaattcacag 38
>37520_dya-mir-263b-1:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 gtcttggcactggaagaattcacag 37
||||||||||||| |||||||||||
Sbjct: 13 gtcttggcactgggagaattcacag 37
>37521_dya-mir-263b-2:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 13 gtcttggcactggaagaattcacag 37
||||||||||||| |||||||||||
Sbjct: 13 gtcttggcactgggagaattcacag 37
>36114_dan-mir-263b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactggaagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 14 tcttggcactgggagaattcacag 37
>36281_dgr-mir-263b:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactggaagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 8 tcttggcactgggagaattcacag 31
>36866_dpe-mir-263b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactggaagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 15 tcttggcactgggagaattcacag 38
>36945_dps-mir-263b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactggaagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 15 tcttggcactgggagaattcacag 38
>37366_dvi-mir-263b:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactggaagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 5 tcttggcactgggagaattcacag 28
>37445_dwi-mir-263b:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 tcttggcactggaagaattcacag 37
|||||||||||| |||||||||||
Sbjct: 2 tcttggcactgggagaattcacag 25
>34978_isc-mir-263a:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 23 tggcactggaagaattcac 41
>35019_dpu-mir-263a:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 22 tggcactggaagaattcac 40
>35202_aae-mir-263a:mirbase
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 16 tggcactggaagaattcac 34
>35203_aae-mir-263b:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 cttggcactggaagaattcacag 37
||||||||||| |||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>35297_aga-mir-263:mirbase
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 16 tggcactggaagaattcac 34
>35298_aga-mir-263b:mirbase
Length = 96
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 cttggcactggaagaattcacag 37
||||||||||| |||||||||||
Sbjct: 16 cttggcactgggagaattcacag 38
>35377_ame-mir-263:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36
>35545_bmo-mir-263a:mirbase
Length = 95
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 21 tggcactggaagaattcac 39
>35546_bmo-mir-263b:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 15 cttggcactggaagaattcacag 37
||||||||||| |||||||||||
Sbjct: 15 cttggcactgggagaattcacag 37
>36030_cqu-mir-263:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 11 tggcactggaagaattcac 29
>36113_dan-mir-263a:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35
>36191_der-mir-263a:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36
>36280_dgr-mir-263a:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35
>36405_dme-mir-263a:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 20 tggcactggaagaattcac 38
>36406_dme-mir-263a:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 20 tggcactggaagaattcac 38
>36789_dmo-mir-263a:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35
>36865_dpe-mir-263a:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36
>36944_dps-mir-263a:mirbase
Length = 92
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 19 tggcactggaagaattcac 37
>37105_dps-mir-3983:mirbase
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 71 tggcactggaagaattcac 53
>37151_dse-mir-263a:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36
>37230_dsi-mir-263a:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36
>37365_dvi-mir-263a:mirbase
Length = 89
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35
>37444_dwi-mir-263a:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 17 tggcactggaagaattcac 35
>37519_dya-mir-263a:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 18 tggcactggaagaattcac 36
>37761_tca-mir-263a:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 20 tggcactggaagaattcac 38
>37762_tca-mir-263a:mirbase
Length = 91
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 17 tggcactggaagaattcac 35
|||||||||||||||||||
Sbjct: 20 tggcactggaagaattcac 38
